Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 2.1e-106 389.0 195 100.0
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.7e-71 273.1 202 73.8
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 7.0e-70 267.7 205 73.2
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.7e-68 263.1 198 73.2
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.1e-66 256.1 199 71.9
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.0e-65 253.8 199 71.9
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 6.8e-65 251.1 137 90.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 2.9e-63 245.7 178 75.8
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 8.3e-63 244.2 156 80.1
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.8e-62 243.0 176 74.4
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 7.0e-62 241.1 192 70.3
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 2.0e-61 239.6 197 68.5
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 2.0e-61 239.6 196 67.3
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.0e-61 239.6 139 86.3
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 7.8e-61 237.7 176 71.6
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 7.8e-61 237.7 159 76.7
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.0e-60 237.3 202 64.9
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 1.3e-60 236.9 192 68.8
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.3e-60 236.9 157 78.3
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.7e-60 236.5 156 77.6
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.7e-60 236.5 170 75.3
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 2.3e-60 236.1 206 66.5
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.0e-60 235.7 193 66.3
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 5.0e-60 235.0 138 86.2
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 6.6e-60 234.6 154 78.6
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 6.6e-60 234.6 207 65.7
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 8.6e-60 234.2 182 71.4
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 1.1e-59 233.8 194 67.5
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.9e-59 233.0 171 71.3
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 2.5e-59 232.6 173 71.1
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 2.5e-59 232.6 178 72.5
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 2.5e-59 232.6 179 70.9
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 3.3e-59 232.3 147 81.0
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 3.3e-59 232.3 137 85.4
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 3.3e-59 232.3 204 64.2
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 3.3e-59 232.3 168 72.6
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 4.3e-59 231.9 139 82.7
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.3e-59 231.9 159 75.5
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.6e-59 231.5 157 77.1
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 7.3e-59 231.1 176 71.6
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 7.3e-59 231.1 185 67.6
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.2e-58 230.3 189 66.7
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 2.1e-58 229.6 157 76.4
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.1e-58 229.6 179 69.8
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.6e-58 228.8 180 68.9
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 4.7e-58 228.4 198 64.1
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 6.2e-58 228.0 176 68.8
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 6.2e-58 228.0 160 74.4
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.1e-57 227.3 125 88.8
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.4e-57 226.9 207 62.8
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.8e-57 226.5 123 87.8
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.3e-57 226.1 125 87.2
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 2.3e-57 226.1 122 90.2
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.3e-57 226.1 170 70.0
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 2.3e-57 226.1 151 78.1
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 3.1e-57 225.7 122 89.3
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 4.0e-57 225.3 176 68.2
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 6.8e-57 224.6 194 60.8
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 6.8e-57 224.6 174 67.8
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 6.8e-57 224.6 163 70.6
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 8.9e-57 224.2 160 71.2
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 8.9e-57 224.2 164 72.0
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.2e-56 223.8 154 76.6
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 1.5e-56 223.4 125 85.6
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.5e-56 223.4 164 68.3
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 3.4e-56 222.2 147 74.1
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 3.4e-56 222.2 155 74.2
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 4.4e-56 221.9 125 84.8
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 9.8e-56 220.7 143 75.5
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 9.8e-56 220.7 164 67.7
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 1.7e-55 219.9 125 84.8
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 2.9e-55 219.2 125 82.4
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 3.7e-55 218.8 137 79.6
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 4.9e-55 218.4 125 83.2
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 6.4e-55 218.0 122 86.1
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 3.2e-54 215.7 209 62.7
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 3.2e-54 215.7 125 80.8
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 4.1e-54 215.3 125 81.6
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 7.0e-54 214.5 125 80.0
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 3.5e-53 212.2 158 67.7
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.5e-53 212.2 133 78.2
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 4.6e-53 211.8 187 60.4
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 4.6e-53 211.8 187 60.4
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 6.0e-53 211.5 166 65.7
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.3e-52 210.3 125 79.2
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.7e-52 209.9 166 64.5
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.9e-52 208.8 187 62.0
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 8.6e-52 207.6 201 57.7
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.1e-51 207.2 233 53.6
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.5e-51 206.8 134 73.9
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 9.5e-51 204.1 143 67.8
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.2e-50 203.8 200 57.5
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 8.1e-50 201.1 202 58.4
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 2.3e-49 199.5 176 60.8
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 6.8e-49 198.0 204 54.9
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 7.5e-48 194.5 185 60.0
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.3e-47 193.7 122 75.4
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.7e-47 192.2 99 94.9
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 3.5e-45 185.7 135 65.9
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 8.6e-44 181.0 122 69.7
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-41 174.1 122 65.6
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.8e-41 173.3 122 66.4
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 4.0e-41 172.2 122 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.9e-38 163.3 106 72.6
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 7.8e-37 157.9 150 61.3
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 2.8e-34 149.4 132 65.2
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 9.0e-33 144.4 121 67.8
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.9e-31 138.7 146 58.2
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 8.4e-31 137.9 192 46.4
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.1e-29 133.3 132 59.1
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 1.8e-25 120.2 170 42.9
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 3.2e-22 109.4 121 47.9
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.1e-21 106.7 152 48.0
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.9e-19 100.1 71 66.2
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.2e-15 86.7 45 86.7
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.4e-15 85.1 88 58.0
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.4e-15 85.1 88 58.0
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 8.4e-15 84.7 110 48.2
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-14 84.3 56 75.0
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 1.8e-12 77.0 114 43.0
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 3.9e-12 75.9 37 89.2
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.5e-08 63.9 42 66.7
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 6.5e-07 58.5 52 57.7


User provided reference genes

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