Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0018363 Lotus japonicus HOM05D008343 ORTHO05D009841 9.4e-38 160.2 91 100.0
Lj4g0017585 Lotus japonicus HOM05D008343 ORTHO05D009841 3.9e-28 128.3 91 72.5
Lalb_Chr05g0226171 Lupinus albus HOM05D008343 ORTHO05D009841 3.2e-22 108.6 90 65.6
TPR.G23902 Trifolium pratense HOM05D002788 ORTHO05D003199 1.2e-19 100.1 80 67.5
Lalb_Chr16g0388911 Lupinus albus HOM05D008343 ORTHO05D009841 3.4e-19 98.6 77 67.5
Glyma.17G166600 Glycine max HOM05D008343 ORTHO05D009841 4.1e-17 91.7 87 70.1
Psat4g082560 Pisum sativum HOM05D008343 ORTHO05D009841 1.6e-16 89.7 87 58.6
Glyma.05G099300 Glycine max HOM05D008343 ORTHO05D009841 2.0e-16 89.4 90 70.0
VMungo0251G2240 Vigna mungo HOM05D008343 ORTHO05D009841 1.1e-14 83.6 78 62.8
Ca_01079_v3 Cicer arietinum L. HOM05D008343 ORTHO05D009841 2.5e-14 82.4 104 57.7
Medtr4g095002 Medicago truncatula HOM05D008343 ORTHO05D009841 2.7e-13 79.0 89 56.2
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.4e-12 76.6 78 56.4
Phvul.003G239800 Phaseolus vulgaris HOM05D008343 ORTHO05D009841 1.7e-10 69.7 78 60.3
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.2e-10 69.3 77 49.4
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.2e-10 69.3 78 50.0
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 5.4e-09 64.7 71 52.1
Thecc.01G063900 Theobroma cacao HOM05D018273 ORTHO05D009841 2.0e-08 62.8 92 45.7
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 2.7e-08 62.4 68 48.5
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 2.7e-08 62.4 73 45.2
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 5.9e-08 61.2 78 48.7
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 2.9e-07 58.9 68 48.5
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 3.8e-07 58.5 83 53.0
CiPaw.01G012500 Carya illinoinensis HOM05D008343 ORTHO05D009841 5.0e-07 58.2 78 48.7
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 6.6e-07 57.8 69 44.9
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 8.6e-07 57.4 66 51.5
Peaxi162Scf00365g00065 Petunia axillaris HOM05D011430 ORTHO05D009841 3.3e-06 55.5 66 51.5
THA.LOC104807602 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 3.3e-06 55.5 62 56.5
THA.LOC109116433 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 3.3e-06 55.5 62 56.5
COL.COLO4_11489 Corchorus olitorius HOM05D018273 ORTHO05D009841 4.2e-06 55.1 80 55.0
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 4.2e-06 55.1 70 41.4
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 5.5e-06 54.7 70 42.9
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.5e-06 54.7 57 54.4
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 5.5e-06 54.7 60 51.7
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 9.5e-06 53.9 61 52.5


User provided reference genes

Program Settings