Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 4.5e-244 847.4 406 100.0
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.9e-202 709.1 411 83.7
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.0e-196 689.1 410 81.2
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 1.3e-195 686.4 409 80.7
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 4.2e-194 681.4 410 80.2
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.1e-193 679.1 411 80.3
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 4.4e-191 671.4 414 78.7
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 2.8e-182 642.1 400 78.5
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.2e-177 626.7 378 79.9
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 5.0e-171 604.7 407 74.9
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.5e-167 593.2 404 71.0
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 2.6e-167 592.4 406 70.7
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 7.5e-167 590.9 402 68.4
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.3e-166 590.1 409 68.5
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 4.9e-166 588.2 390 72.3
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 8.3e-166 587.4 409 68.2
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.1e-165 587.0 403 68.7
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.1e-165 587.0 405 69.9
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.4e-165 586.6 436 66.3
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 4.1e-165 585.1 389 71.5
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 2.0e-164 582.8 404 68.8
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.7e-164 582.4 424 64.9
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.3e-163 580.1 410 66.3
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.9e-162 576.2 397 69.0
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 4.3e-162 575.1 390 68.7
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.6e-161 573.2 400 67.5
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.8e-161 572.4 403 69.5
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 8.9e-160 567.4 404 68.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.2e-158 562.8 404 67.6
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.1e-157 560.5 406 66.0
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.9e-157 559.7 399 65.2
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 4.1e-157 558.5 403 65.5
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 5.4e-157 558.1 404 64.9
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 5.4e-157 558.1 406 65.5
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 9.2e-157 557.4 405 66.9
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.1e-156 556.2 406 65.5
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 4.6e-156 555.1 406 64.5
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 6.0e-156 554.7 397 68.0
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 7.8e-156 554.3 404 65.8
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.3e-155 552.7 384 67.7
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 2.3e-155 552.7 405 64.9
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.3e-155 552.7 404 64.4
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 5.1e-155 551.6 404 64.1
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 9.5e-154 547.4 460 60.2
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 3.1e-152 542.3 408 63.2
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 2.6e-151 539.3 406 63.8
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.2e-150 536.2 402 64.7
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 2.9e-150 535.8 431 60.3
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.1e-149 533.9 417 62.1
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 4.6e-148 528.5 389 64.5
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 6.0e-148 528.1 353 69.4
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 7.8e-148 527.7 410 62.4
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.3e-147 526.9 389 63.2
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 2.3e-147 526.2 388 63.9
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 2.3e-147 526.2 389 64.0
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.0e-147 525.8 403 62.0
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 3.9e-147 525.4 388 63.7
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.5e-146 522.7 388 63.7
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.5e-146 522.7 388 63.7
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.5e-146 522.7 402 61.9
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 7.3e-146 521.2 389 62.5
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 2.1e-145 519.6 397 62.0
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.1e-144 517.3 411 63.0
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.1e-144 517.3 397 65.0
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 3.1e-144 515.8 411 59.9
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-143 513.1 407 60.7
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 3.4e-143 512.3 404 60.1
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 7.6e-143 511.1 388 64.2
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 3.8e-142 508.8 426 58.2
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 2.4e-141 506.1 399 60.4
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 7.1e-141 504.6 397 62.2
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 1.6e-140 503.4 417 58.8
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.0e-139 500.7 402 60.0
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 8.7e-139 497.7 448 55.1
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 6.9e-136 488.0 366 65.3
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.9e-133 479.9 442 54.8
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 7.9e-132 474.6 376 59.6
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.5e-130 469.5 356 64.6
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 6.9e-128 461.5 384 59.9
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 4.5e-127 458.8 357 59.7
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.0e-123 447.6 340 65.9
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.3e-123 447.2 355 60.6
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.4e-120 437.2 293 72.4
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 4.0e-120 435.6 413 51.3
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 6.9e-120 434.9 354 60.2
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.6e-116 422.2 397 57.4
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 4.6e-108 395.6 358 57.0
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 6.1e-108 395.2 440 54.3
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.8e-107 393.7 296 61.8
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.8e-99 367.1 403 45.9
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.2e-94 350.1 259 65.3
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 4.7e-92 342.4 184 84.8
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.1e-90 337.8 256 64.5
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.8e-88 330.5 405 43.2
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 2.4e-88 330.1 213 68.5
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.3e-86 324.3 253 64.0
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 2.8e-81 306.6 335 44.2
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 2.4e-80 303.5 391 41.7
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 7.0e-80 302.0 341 43.7
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.8e-78 296.2 349 43.0
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.3e-75 287.0 397 42.3
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 5.2e-75 285.8 230 62.2
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.2e-66 258.1 216 56.9
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 1.1e-61 241.5 212 57.5
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.0e-59 235.0 198 58.1
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 4.9e-57 226.1 147 74.8
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.2e-56 223.4 191 57.6
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.2e-55 221.5 119 85.7
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.6e-55 221.1 224 51.8
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 9.5e-53 211.8 101 95.0
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.3e-49 201.4 137 70.1
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.9e-48 197.6 298 41.6
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 4.1e-48 196.4 294 39.1
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.5e-42 177.9 107 79.4
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 9.6e-29 132.1 98 58.2
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 6.9e-27 125.9 119 52.1
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 1.0e-22 112.1 103 52.4
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.2e-15 88.6 90 50.0
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.3e-13 80.1 101 40.6
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 9.0e-11 72.4 41 78.0


User provided reference genes

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