Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 4.0e-236 821.2 479 100.0
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 1.9e-164 583.2 463 79.0
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 1.0e-162 577.4 418 84.2
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 3.0e-162 575.9 420 82.9
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 5.8e-158 561.6 493 74.0
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 2.9e-149 532.7 420 80.5
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 1.1e-148 530.8 418 76.1
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 4.7e-144 515.4 391 80.8
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.1e-136 490.0 495 60.2
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 5.3e-135 485.3 491 60.3
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 4.4e-134 482.3 422 71.1
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 9.9e-134 481.1 503 61.2
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 2.2e-133 479.9 419 65.9
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 2.2e-133 479.9 453 66.0
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 4.2e-132 475.7 420 67.6
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 7.1e-132 474.9 419 69.2
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.1e-131 473.4 489 62.4
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 8.7e-130 468.0 487 66.5
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 1.1e-129 467.6 483 60.2
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.5e-129 467.2 421 68.2
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.5e-129 466.5 420 67.4
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 3.3e-129 466.1 419 71.1
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 4.3e-129 465.7 432 66.9
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 2.1e-128 463.4 490 63.9
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 1.4e-127 460.7 514 60.3
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 1.4e-127 460.7 437 64.1
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 1.4e-127 460.7 497 62.6
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 1.8e-127 460.3 418 68.4
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 1.8e-127 460.3 419 70.6
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 1.2e-126 457.6 421 68.9
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.6e-126 456.4 430 67.9
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 5.8e-126 455.3 433 63.7
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 9.9e-126 454.5 435 66.0
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.8e-125 452.6 485 61.2
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 3.8e-125 452.6 491 64.2
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 3.8e-125 452.6 481 59.7
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 1.1e-124 451.1 430 67.2
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 1.1e-124 451.1 429 66.2
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 1.9e-124 450.3 422 67.3
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 3.2e-124 449.5 421 67.2
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 5.5e-124 448.7 454 61.9
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 7.1e-124 448.4 429 66.4
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 2.1e-123 446.8 428 62.6
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 1.0e-122 444.5 495 62.4
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 1.3e-122 444.1 424 66.0
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 6.7e-122 441.8 490 62.4
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.1e-121 441.0 482 62.4
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 1.5e-121 440.7 422 67.1
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 1.5e-121 440.7 487 60.8
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 6.2e-120 435.3 481 63.4
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.1e-119 434.5 493 60.6
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 4.0e-119 432.6 417 67.4
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 2.6e-118 429.9 449 62.6
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 2.6e-118 429.9 421 66.5
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 5.8e-118 428.7 486 61.7
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 7.6e-118 428.3 490 62.0
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.7e-117 427.2 379 71.0
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 2.2e-117 426.8 417 66.2
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 2.2e-117 426.8 449 62.4
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 2.2e-117 426.8 422 65.2
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 2.9e-117 426.4 441 64.9
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 1.1e-116 424.5 428 63.3
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 6.0e-115 418.7 493 58.4
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 6.0e-115 418.7 493 58.4
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 2.3e-114 416.8 420 64.3
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 3.9e-114 416.0 418 65.6
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 1.9e-113 413.7 606 49.7
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 7.4e-113 411.8 430 63.5
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 9.6e-113 411.4 449 61.0
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 9.6e-113 411.4 417 64.7
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 1.3e-112 411.0 422 64.0
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 8.2e-112 408.3 404 64.6
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 1.4e-111 407.5 500 53.8
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 5.3e-111 405.6 416 65.4
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 1.2e-110 404.4 419 62.8
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 2.6e-110 403.3 406 63.8
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 1.3e-109 401.0 431 62.4
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 2.9e-109 399.8 416 63.5
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 5.0e-109 399.1 446 60.1
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 8.4e-109 398.3 418 63.9
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 1.2e-107 394.4 484 56.4
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 2.1e-107 393.7 415 66.3
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.0e-106 391.3 436 59.6
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 6.7e-106 388.7 319 78.1
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 1.3e-104 384.4 460 56.5
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 5.3e-103 379.0 442 59.5
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.2e-102 377.9 322 75.5
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 3.9e-98 362.8 366 66.1
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 2.0e-97 360.5 415 61.2
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 2.0e-94 350.5 375 57.3
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 4.2e-92 342.8 292 70.5
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 1.8e-90 337.4 416 52.4
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.0e-89 334.0 439 52.8
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.0e-89 334.0 439 52.8
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.8e-87 327.4 378 60.1
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 7.0e-87 325.5 411 49.9
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 9.1e-87 325.1 425 54.4
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.5e-85 318.9 293 64.5
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.2e-84 316.6 471 49.0
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 6.1e-83 312.4 477 54.1
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 4.8e-80 302.8 293 65.2
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 3.2e-76 290.0 288 63.5
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 4.2e-76 289.7 285 63.9
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 1.8e-74 284.3 285 62.1
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 1.5e-73 281.2 642 40.8
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 7.5e-73 278.9 415 50.1
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 1.2e-70 271.6 319 59.6
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 4.2e-68 263.1 346 50.6
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.5e-65 254.6 187 73.3
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 6.3e-64 249.2 415 50.6
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 2.3e-61 240.7 379 47.8
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 3.7e-56 223.4 331 50.2
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 1.8e-55 221.1 363 52.6
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 7.3e-52 209.1 288 59.0
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 6.4e-48 196.1 566 37.1
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 2.3e-42 177.6 170 67.1
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 8.1e-35 152.5 103 78.6
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 1.1e-34 152.1 313 47.9
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 1.8e-34 151.4 87 86.2
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 2.7e-30 137.5 195 49.2
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 7.8e-30 136.0 119 65.5
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 1.9e-28 131.3 368 30.2
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.2e-25 122.1 177 63.3
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 4.9e-24 116.7 95 88.4
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 2.1e-22 111.3 84 70.2
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 7.8e-22 109.4 69 76.8
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 5.1e-21 106.7 92 63.0
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 2.5e-20 104.4 93 83.9
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 1.3e-16 92.0 73 61.6
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 1.0e-13 82.4 172 45.9
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.3e-13 82.0 63 69.8
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.8e-13 81.6 96 54.2
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 2.8e-11 74.3 98 50.0
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 5.8e-09 66.6 162 28.4
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 9.9e-09 65.9 87 47.1
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 9.9e-09 65.9 43 76.7
C09p44560 Brassica napus HOM05D041588 ORTHO05D006779 2.9e-08 64.3 112 44.6
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 9.3e-07 59.3 39 76.9


User provided reference genes

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