Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 3.2e-169 599.0 476 100.0
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 3.4e-126 456.1 415 77.3
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 4.1e-124 449.1 417 78.7
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.2e-120 437.6 413 76.5
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 8.1e-120 434.9 425 78.8
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.9e-116 423.7 415 73.7
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 4.3e-113 412.5 430 75.3
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.1e-112 410.2 385 78.4
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.7e-107 393.3 432 71.5
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.1e-105 387.9 407 76.7
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 2.1e-104 383.6 410 77.3
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 3.4e-102 376.3 397 73.0
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 6.4e-101 372.1 412 74.5
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.3e-98 363.6 413 73.8
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.1e-98 362.5 407 73.5
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-97 361.3 407 72.5
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.6e-96 357.5 371 74.9
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.8e-95 354.0 392 73.5
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 2.6e-94 350.1 414 71.7
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 2.9e-93 346.7 479 67.4
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 3.8e-93 346.3 409 72.1
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 4.9e-93 345.9 416 70.7
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-92 344.4 424 64.6
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.4e-92 344.4 412 67.2
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.6e-91 340.9 394 70.3
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.3e-90 337.8 413 58.4
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.3e-90 337.8 410 67.6
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.8e-90 337.4 412 74.3
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.3e-90 337.0 405 71.1
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 5.1e-90 335.9 418 70.6
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 8.7e-90 335.1 417 73.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 9.7e-89 331.6 391 71.9
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 9.7e-89 331.6 416 70.7
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 1.3e-88 331.3 396 71.7
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 3.7e-88 329.7 401 68.6
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 3.7e-88 329.7 395 69.4
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 3.7e-88 329.7 410 66.8
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 6.3e-88 328.9 415 71.8
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.3e-88 328.9 413 70.0
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 5.3e-87 325.9 411 69.8
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 5.3e-87 325.9 410 65.9
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.2e-86 324.7 402 67.2
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.5e-86 324.3 415 67.7
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 3.4e-86 323.2 395 66.1
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.4e-86 323.2 409 62.6
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 7.6e-86 322.0 415 66.5
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 1.3e-85 321.2 419 68.3
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.3e-85 321.2 251 74.5
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.3e-85 321.2 251 74.5
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.3e-85 321.2 418 68.2
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 8.5e-85 318.5 417 66.4
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 8.5e-85 318.5 415 66.7
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.9e-84 317.4 419 67.8
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.9e-84 317.4 411 59.1
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 9.3e-84 315.1 422 67.5
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.7e-83 313.5 409 70.2
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 3.6e-83 313.2 416 67.8
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 4.6e-83 312.8 252 77.8
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 4.6e-83 312.8 387 67.2
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.0e-82 311.6 356 62.9
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.3e-82 311.2 419 58.5
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 2.3e-82 310.5 414 64.7
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.3e-81 306.6 214 81.8
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 4.3e-81 306.2 365 74.5
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.3e-80 304.7 420 63.8
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 3.7e-80 303.1 415 68.4
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 4.8e-80 302.8 394 56.9
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 6.3e-80 302.4 414 64.3
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 1.4e-79 301.2 411 63.0
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 5.3e-79 299.3 407 64.4
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 5.9e-78 295.8 399 63.2
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.1e-76 291.6 439 62.0
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.9e-76 290.8 255 71.4
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 7.2e-76 288.9 362 64.4
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 2.1e-75 287.3 440 62.3
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 7.9e-75 285.4 412 64.1
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.8e-74 284.3 408 64.7
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 2.3e-74 283.9 260 64.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.1e-74 282.7 216 74.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 3.7e-72 276.6 165 81.8
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.1e-71 275.0 409 60.9
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.4e-71 273.9 415 62.2
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 5.3e-71 272.7 388 62.1
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.5e-70 269.6 165 79.4
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 4.5e-70 269.6 214 74.3
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 5.0e-69 266.2 400 60.5
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.1e-67 260.8 253 61.7
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.5e-65 254.6 216 69.0
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.5e-65 254.6 147 84.4
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 2.6e-65 253.8 171 72.5
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.3e-64 251.5 165 75.2
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.2e-64 250.8 160 74.4
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.7e-64 250.0 216 67.6
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.4e-63 248.1 165 73.3
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.4e-63 248.1 165 73.3
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.4e-63 248.1 165 73.3
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 7.0e-63 245.7 165 72.7
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.2e-62 245.0 167 73.7
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.9e-60 237.7 267 60.3
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 6.1e-59 232.6 165 71.5
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.2e-56 224.2 164 67.7
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.5e-52 211.5 155 67.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 8.0e-51 205.7 366 60.7
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-50 204.9 172 61.0
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.0e-50 203.8 163 64.4
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.4e-49 199.9 166 63.3
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.4e-49 199.9 166 63.3
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 2.7e-38 164.1 152 57.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 2.3e-34 151.0 165 50.9
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 3.5e-30 137.1 167 47.3
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 3.6e-27 127.1 166 44.6
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 5.0e-21 106.7 161 42.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.2e-17 95.5 139 41.7
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 4.9e-16 90.1 62 71.0
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.5e-12 77.8 95 49.5
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 3.3e-12 77.4 112 40.2
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.7e-08 65.1 82 45.1


User provided reference genes

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