Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0016224 Lotus japonicus HOM05D003660 ORTHO05D003415 2.8e-85 318.5 159 100.0
Lj3g0024971 Lotus japonicus HOM05D003660 ORTHO05D003415 3.5e-11 72.4 49 73.5
Phvul.005G121700 Phaseolus vulgaris HOM05D003660 ORTHO05D003415 8.7e-10 67.8 49 69.4
Glyma.13G314500 Glycine max HOM05D003660 ORTHO05D003415 2.5e-09 66.2 49 67.3
VMungo1080G1056 Vigna mungo HOM05D003660 ORTHO05D003415 2.5e-09 66.2 49 69.4
Glyma.12G186952 Glycine max HOM05D003660 ORTHO05D003415 7.3e-09 64.7 49 67.3
Lalb_Chr14g0376021 Lupinus albus HOM05D003660 ORTHO05D003415 1.6e-08 63.5 49 61.2
Lj1g0001369 Lotus japonicus HOM05D000205 ORTHO05D000438 4.8e-08 62.0 35 88.6
Lj1g0012324 Lotus japonicus HOM05D000205 ORTHO05D000438 1.1e-07 60.8 35 85.7
arahy.Tifrunner.gnm1.ann1.PLL1TV Arachis hypogaea HOM05D003660 ORTHO05D003415 1.4e-07 60.5 49 63.3
Lj1g0017409 Lotus japonicus HOM05D000205 ORTHO05D000438 1.4e-07 60.5 35 85.7
Medtr2g086880 Medicago truncatula HOM05D000010 ORTHO05D005236 1.8e-07 60.1 49 59.2
arahy.Tifrunner.gnm1.ann1.W33SWH Arachis hypogaea HOM05D003660 ORTHO05D003415 4.0e-07 58.9 59 59.3
Ca_01643_v3 Cicer arietinum L. HOM05D000010 ORTHO05D005236 6.9e-07 58.2 49 61.2
CSS0013947 Camellia sinensis var. sinensis HOM05D003660 ORTHO05D003415 9.0e-07 57.8 55 58.2
Ciclev10029624m.g Citrus clementina HOM05D003660 ORTHO05D003415 1.5e-06 57.0 55 56.4
TPR.G36105 Trifolium pratense HOM05D003660 ORTHO05D003415 2.0e-06 56.6 34 73.5
Glyma.19G152400 Glycine max HOM05D000205 ORTHO05D000438 2.6e-06 56.2 35 80.0
Phvul.001G147200 Phaseolus vulgaris HOM05D000205 ORTHO05D000438 2.6e-06 56.2 35 80.0
TWI31G1256 Tripterygium wilfordii HOM05D003660 ORTHO05D003415 2.6e-06 56.2 59 49.2
Actinidia35475 Actinidia chinensis HOM05D003660 ORTHO05D003415 4.5e-06 55.5 55 56.4
Gohir.A09G097300 Gossypium hirsutum HOM05D003660 ORTHO05D003415 5.8e-06 55.1 49 57.1
Gorai.006G113800 Gossypium raimondii HOM05D003660 ORTHO05D003415 5.8e-06 55.1 49 57.1
Prupe.6G138900 Prunus persica HOM05D003660 ORTHO05D003415 5.8e-06 55.1 49 53.1
Cpa.g.sc195.36 Carica papaya HOM05D003660 ORTHO05D003415 7.6e-06 54.7 52 55.8
Glyma.03G149200 Glycine max HOM05D000205 ORTHO05D000438 7.6e-06 54.7 34 79.4
Rhsim01G0202600 Rhododendron simsii HOM05D003660 ORTHO05D003415 7.6e-06 54.7 52 51.9
vmacro14331 Vaccinium macrocarpon HOM05D003660 ORTHO05D003415 7.6e-06 54.7 52 53.8
Glyma.03G149333 Glycine max HOM05D000205 ORTHO05D000438 9.9e-06 54.3 35 77.1
Phvul.001G147100 Phaseolus vulgaris HOM05D000205 ORTHO05D000438 9.9e-06 54.3 34 73.5


User provided reference genes

Program Settings