Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 9.0e-108 393.7 208 100.0
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.1e-60 237.3 205 62.9
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 4.1e-52 208.8 210 59.5
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 3.0e-50 202.6 212 58.5
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 1.1e-49 200.7 221 57.9
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 9.8e-46 187.6 220 54.1
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 8.3e-45 184.5 218 54.6
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 8.1e-32 141.4 168 55.4
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.2e-24 117.5 205 40.0
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 3.1e-23 112.8 196 38.8
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 7.6e-22 108.2 206 39.3
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 2.9e-21 106.3 210 36.2
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 8.4e-21 104.8 201 37.3
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.4e-20 104.0 201 39.8
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 7.1e-20 101.7 204 36.8
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.6e-19 100.5 208 34.6
arahy.Tifrunner.gnm1.ann1.0J46GK Arachis hypogaea HOM05D031312 ORTHO05D008531 6.0e-19 98.6 161 45.3
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 6.0e-19 98.6 212 34.4
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.0e-18 97.8 195 37.9
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.7e-18 97.1 201 36.3
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 2.3e-18 96.7 207 34.8
arahy.Tifrunner.gnm1.ann1.MRR6R9 Arachis hypogaea HOM05D031312 ORTHO05D008531 6.6e-18 95.1 151 45.7
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 1.1e-17 94.4 207 33.8
Glyma.05G203500 Glycine max HOM05D031312 ORTHO05D008531 4.8e-16 89.0 156 44.9
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.1e-15 87.8 223 34.5
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.1e-15 87.8 223 34.5
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.1e-15 87.8 223 34.5
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.4e-15 87.4 221 33.9
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 1.8e-15 87.0 204 35.3
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 2.4e-15 86.7 205 33.7
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.1e-15 86.3 199 32.2
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.3e-15 85.5 225 33.8
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.5e-14 84.0 217 35.9
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.0e-14 83.6 229 33.6
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.6e-14 83.2 223 34.5
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 9.9e-14 81.3 209 33.5
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.2e-13 80.1 217 32.3
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 2.2e-13 80.1 225 32.9
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 6.4e-13 78.6 200 32.0
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.9e-12 77.0 208 31.7
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 3.2e-12 76.3 224 31.2
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 4.2e-12 75.9 204 30.4
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 4.2e-12 75.9 204 30.9
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 5.4e-12 75.5 209 32.1
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 7.1e-12 75.1 207 32.9
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 7.1e-12 75.1 208 30.8
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.2e-11 74.3 144 33.3
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.6e-11 73.9 204 32.4
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.6e-11 73.9 218 30.7
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 2.1e-11 73.6 216 30.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.7e-11 73.2 232 30.2
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 7.9e-11 71.6 225 28.4
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.8e-10 70.5 219 30.6
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.8e-10 70.5 207 32.4
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 2.3e-10 70.1 161 36.6
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 2.3e-10 70.1 237 28.7
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 3.9e-10 69.3 207 30.0
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 8.7e-10 68.2 234 27.8
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 8.7e-10 68.2 208 29.3
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.5e-09 67.4 228 26.8
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.5e-09 67.4 229 28.8
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 1.9e-09 67.0 223 29.1
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 2.5e-09 66.6 213 30.5
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 3.3e-09 66.2 236 27.5
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 5.6e-09 65.5 242 28.1
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.6e-08 63.9 234 30.3
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.6e-08 63.9 241 29.0
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 2.8e-08 63.2 233 26.6
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.1e-07 61.2 240 27.5
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 1.4e-07 60.8 242 27.7
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 1.8e-07 60.5 239 29.7
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 2.4e-07 60.1 199 28.1
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 2.4e-07 60.1 199 28.1
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 3.1e-07 59.7 200 32.0
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 3.1e-07 59.7 115 34.8
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 6.9e-07 58.5 205 29.8
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 1.5e-06 57.4 200 28.5
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 1.5e-06 57.4 254 27.2
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 2.6e-06 56.6 230 29.1
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 4.5e-06 55.8 196 27.0
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 7.6e-06 55.1 97 34.0


User provided reference genes

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