Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 5.9e-46 187.2 95 100.0
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.3e-37 159.5 93 86.0
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 6.5e-37 157.1 93 83.9
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 3.2e-36 154.8 92 80.4
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.2e-36 154.5 92 83.7
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.2e-35 152.9 92 80.4
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.7e-35 151.8 92 82.6
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 2.7e-35 151.8 92 82.6
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.7e-35 151.8 92 81.5
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.7e-35 151.8 92 81.5
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 6.1e-35 150.6 92 78.3
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.1e-35 150.6 92 81.5
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 7.9e-35 150.2 92 80.4
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.0e-34 149.8 92 79.3
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.0e-34 149.8 92 79.3
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.8e-34 149.1 93 81.7
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.8e-34 149.1 92 82.6
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 2.3e-34 148.7 92 78.3
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 6.7e-34 147.1 92 77.2
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 1.5e-33 146.0 92 78.3
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.6e-33 145.2 93 79.6
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.3e-33 144.8 92 78.3
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 3.3e-33 144.8 92 78.3
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 3.3e-33 144.8 92 76.1
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.4e-33 144.4 92 78.3
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 4.4e-33 144.4 92 78.3
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.7e-33 144.1 93 76.3
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 9.7e-33 143.3 92 76.1
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 1.7e-32 142.5 92 76.1
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 2.2e-32 142.1 92 77.2
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.2e-32 142.1 93 78.5
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.2e-32 142.1 92 75.0
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 2.2e-32 142.1 92 75.0
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 2.2e-32 142.1 92 77.2
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.8e-32 141.7 93 75.3
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.8e-32 141.7 93 75.3
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 6.3e-32 140.6 92 75.0
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 8.2e-32 140.2 92 73.9
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.1e-31 139.8 92 76.1
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.4e-31 139.4 92 73.9
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.8e-31 139.0 90 75.6
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.8e-31 139.0 92 73.9
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 3.1e-31 138.3 94 77.7
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.1e-31 138.3 92 73.9
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 4.1e-31 137.9 93 74.2
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 4.1e-31 137.9 92 73.9
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 4.1e-31 137.9 92 71.7
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 4.1e-31 137.9 92 76.1
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 4.1e-31 137.9 93 75.3
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.3e-31 137.5 89 75.3
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 7.0e-31 137.1 92 73.9
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 7.0e-31 137.1 92 73.9
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.2e-30 136.3 92 72.8
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 1.2e-30 136.3 92 75.0
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.6e-30 136.0 93 75.3
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.0e-30 135.6 87 74.7
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.6e-30 135.2 92 72.8
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 5.9e-30 134.0 93 71.0
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.9e-30 134.0 93 71.0
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.9e-30 134.0 93 71.0
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 5.9e-30 134.0 93 72.0
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 7.7e-30 133.7 92 71.7
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 7.7e-30 133.7 92 71.7
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 1.0e-29 133.3 92 70.7
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.7e-29 132.5 92 70.7
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 2.9e-29 131.7 80 80.0
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 2.9e-29 131.7 93 69.9
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 5.0e-29 131.0 92 70.7
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 5.0e-29 131.0 92 70.7
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 6.5e-29 130.6 92 68.5
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.5e-28 129.4 92 67.4
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.5e-28 128.6 91 69.2
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.5e-28 128.6 92 69.6
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.2e-27 126.3 92 68.5
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.1e-27 125.6 92 65.2
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.7e-27 124.4 92 64.1
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.8e-26 122.5 88 65.9
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.8e-26 122.5 91 69.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-25 119.8 121 54.5
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.0e-25 119.0 91 61.5
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 2.0e-25 119.0 93 65.6
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 4.4e-25 117.9 95 68.4
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 5.7e-25 117.5 92 63.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 7.5e-25 117.1 84 65.5
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.7e-24 115.9 92 60.9
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 6.3e-24 114.0 84 61.9
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 8.2e-24 113.6 75 73.3
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.4e-23 112.8 73 72.6
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.1e-23 111.7 68 76.5
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 5.3e-23 110.9 69 75.4
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 9.1e-23 110.2 92 58.7
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 9.1e-23 110.2 92 59.8
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 9.1e-23 110.2 92 59.8
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 9.1e-23 110.2 92 58.7
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 9.1e-23 110.2 92 58.7
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 9.1e-23 110.2 92 58.7
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.6e-22 109.4 83 63.9
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 2.7e-22 108.6 70 80.0
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 2.7e-22 108.6 84 66.7
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.5e-22 107.8 65 81.5
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.0e-21 106.7 86 60.5
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 1.0e-21 106.7 80 65.0
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 8.5e-21 103.6 83 65.1
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 8.0e-19 97.1 67 77.6
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 1.4e-18 96.3 92 52.2
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.6e-17 92.0 93 53.8
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 7.0e-15 84.0 67 64.2
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.0e-13 80.1 65 61.5
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.2e-06 56.6 94 42.6
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 1.2e-06 56.6 91 39.6
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 4.5e-06 54.7 96 39.6


User provided reference genes

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