Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 3.3e-206 721.5 367 100.0
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 3.3e-161 572.0 370 81.1
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 8.1e-160 567.4 370 80.5
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-75 287.0 372 43.5
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-51 206.8 390 33.8
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-43 179.9 293 36.2
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 9.9e-41 171.8 303 35.0
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-39 167.9 313 35.8
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-39 167.9 342 32.2
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 4.1e-39 166.4 313 35.5
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 9.2e-39 165.2 305 33.1
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-38 162.9 327 30.9
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-37 161.0 365 29.3
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-37 160.6 299 33.4
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-36 157.5 288 34.7
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 3.3e-36 156.8 301 33.9
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-35 154.5 265 34.0
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-35 153.7 190 44.7
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-34 151.4 306 33.0
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-33 148.3 295 33.2
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-29 133.7 151 43.0
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 3.9e-29 133.3 169 37.9
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-28 131.0 280 32.1
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 5.6e-28 129.4 299 31.4
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 4.7e-27 126.3 190 36.3
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-26 124.8 273 30.8
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 4.0e-26 123.2 371 28.6
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 6.4e-24 115.9 159 37.1
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 6.4e-24 115.9 213 32.9
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 8.4e-24 115.5 193 33.2
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-22 110.5 213 31.5
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-22 110.2 261 28.7
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 4.3e-20 103.2 235 31.5
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 7.3e-20 102.4 120 40.0
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 9.6e-20 102.1 197 32.0
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-19 101.7 115 43.5
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-18 97.1 282 25.9
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 6.9e-18 95.9 120 40.8
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-17 95.1 120 39.2
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-16 91.3 285 25.3
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-16 91.3 285 25.3
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-16 90.9 161 29.8
Lj2g0013073 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-16 90.9 228 28.5
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-16 90.5 321 23.4
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-14 85.1 106 36.8
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-14 84.3 213 28.2
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 6.0e-14 82.8 179 30.2
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-13 80.5 134 34.3
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-13 80.5 120 32.5
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-12 77.8 280 25.0
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 1.9e-12 77.8 178 29.2
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-11 74.7 280 22.1
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.1e-11 72.4 291 22.7
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 8.1e-11 72.4 178 30.3
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 5.3e-10 69.7 285 23.9
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.0e-10 68.9 276 26.1
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.6e-09 67.4 97 37.1
Lj1g0022989 Lotus japonicus HOM05D008220 ORTHO05D010358 4.5e-09 66.6 75 40.0
Lj5g0026451 Lotus japonicus HOM05D008220 ORTHO05D010358 4.5e-09 66.6 211 24.2
Atru.chr3.2350 Acer truncatum HOM05D016018 ORTHO05D017146 5.8e-09 66.2 323 23.2
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 1.3e-08 65.1 330 22.1
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-08 64.3 84 35.7
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.4e-08 62.8 292 20.9
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.9e-07 61.2 303 21.8
Medtr5g055560 Medicago truncatula HOM05D002777 ORTHO05D001516 2.4e-07 60.8 298 24.2
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.4e-07 60.8 100 33.0
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-07 60.5 292 20.9
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.2e-07 60.1 87 34.5
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 7.1e-07 59.3 136 29.4
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 7.1e-07 59.3 94 30.9
Lj2g0000461 Lotus japonicus HOM05D008220 ORTHO05D010358 7.1e-07 59.3 49 53.1
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.1e-07 59.3 260 22.3
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.3e-07 58.9 78 37.2
Lj6g0008950 Lotus japonicus HOM05D019244 ORTHO05D036501 1.2e-06 58.5 79 35.4
LjContig00272g0003214 Lotus japonicus HOM05D019244 ORTHO05D036501 1.2e-06 58.5 79 35.4
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-06 58.2 307 18.9
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-06 57.8 98 30.6
Lj6g0001789 Lotus japonicus HOM05D019244 ORTHO05D010358 2.7e-06 57.4 63 38.1
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.5e-06 57.0 286 19.2
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-06 57.0 109 33.0
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.6e-06 56.6 114 29.8
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.0e-06 56.2 91 30.8
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 6.0e-06 56.2 130 28.5
Lj6g0023930 Lotus japonicus HOM05D002777 ORTHO05D001516 6.0e-06 56.2 143 27.3
Pp3c4_6610 Physcomitrium patens HOM05D000142 ORTHO05D000124 6.0e-06 56.2 110 33.6
MBI08_g05234_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 7.9e-06 55.8 307 22.8
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.9e-06 55.8 76 34.2
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 7.9e-06 55.8 269 21.6
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.9e-06 55.8 76 34.2


User provided reference genes

Program Settings