Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.5e-109 399.4 194 100.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 5.5e-99 364.4 194 89.7
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.5e-96 356.3 195 88.7
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 2.8e-95 352.1 195 86.7
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 3.7e-95 351.7 195 86.7
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 2.4e-94 349.0 195 87.2
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 7.2e-91 337.4 195 81.0
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.5e-88 329.7 183 86.3
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.8e-86 322.8 200 82.5
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 5.0e-84 314.7 200 80.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.3e-79 300.1 156 91.0
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 2.4e-78 295.8 194 73.2
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 6.5e-76 287.7 191 72.8
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.2e-74 283.5 194 69.6
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 2.1e-74 282.7 194 71.1
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 8.0e-74 280.8 194 67.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 1.8e-73 279.6 194 67.5
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 2.3e-73 279.3 194 68.6
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 5.2e-73 278.1 194 68.6
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 5.2e-73 278.1 194 68.6
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 6.7e-73 277.7 194 68.0
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 6.7e-73 277.7 194 67.5
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 8.8e-73 277.3 194 68.6
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 3.3e-72 275.4 194 68.0
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 7.5e-72 274.2 194 67.0
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 7.5e-72 274.2 194 67.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 9.7e-72 273.9 194 69.1
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.2e-71 272.7 194 68.6
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.8e-71 271.6 193 67.9
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.1e-70 270.4 194 66.5
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.4e-70 270.0 194 67.5
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 5.3e-70 268.1 194 66.5
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 7.0e-70 267.7 194 66.0
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 9.1e-70 267.3 194 66.5
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 9.1e-70 267.3 193 71.0
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.2e-69 266.9 194 66.5
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.2e-69 266.9 200 66.0
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.2e-69 266.9 194 66.0
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.2e-69 266.9 194 68.6
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.0e-69 266.2 194 68.6
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 2.0e-69 266.2 193 69.4
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.7e-69 265.8 194 68.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.7e-69 265.8 194 66.0
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 3.5e-69 265.4 194 67.0
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 4.5e-69 265.0 194 63.4
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 5.9e-69 264.6 194 67.5
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.2e-68 262.7 195 65.1
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 2.9e-68 262.3 195 66.7
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.1e-67 260.4 198 64.1
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.9e-67 259.6 196 64.8
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 2.5e-67 259.2 194 67.0
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.5e-67 259.2 196 65.3
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 4.2e-67 258.5 195 65.1
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.2e-67 257.7 194 66.0
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.1e-66 256.1 197 64.5
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 3.6e-66 255.4 194 64.4
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 3.6e-66 255.4 256 53.1
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.0e-65 253.8 195 67.7
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.8e-65 253.1 195 63.6
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 2.3e-65 252.7 191 63.9
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.2e-65 251.5 194 64.4
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 2.0e-64 249.6 194 63.9
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 9.8e-64 247.3 196 64.8
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 4.8e-63 245.0 190 62.1
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.1e-62 243.8 191 61.3
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.1e-62 243.8 194 62.4
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.1e-62 243.8 194 62.4
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.4e-62 243.4 228 56.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.8e-62 243.0 190 64.2
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.8e-62 243.0 195 63.1
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.8e-62 243.0 195 63.1
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 2.4e-62 242.7 195 65.1
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 4.1e-62 241.9 197 62.4
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 5.4e-62 241.5 193 66.3
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 4.5e-61 238.4 195 64.1
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.5e-61 238.4 195 64.1
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 4.5e-61 238.4 194 61.9
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.0e-60 237.3 194 61.9
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.3e-60 236.9 195 63.6
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.3e-60 236.9 196 60.7
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.3e-60 236.9 179 63.1
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.7e-60 236.5 195 63.6
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.9e-59 233.0 197 58.4
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.9e-59 233.0 195 59.0
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 7.2e-59 231.1 197 59.4
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 4.7e-58 228.4 194 59.3
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 6.1e-58 228.0 195 61.0
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 2.3e-57 226.1 196 58.2
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.0e-56 223.0 165 67.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 4.4e-56 221.9 166 66.9
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 2.8e-55 219.2 152 67.8
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 8.3e-55 217.6 190 57.4
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 4.5e-53 211.8 147 69.4
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.5e-51 206.8 195 59.0
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.4e-49 200.3 156 64.1
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.4e-49 200.3 150 65.3
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 5.7e-48 194.9 195 54.9
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.1e-46 190.7 166 57.2
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 7.0e-46 188.0 158 60.8
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 2.7e-45 186.0 150 62.7
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.7e-37 159.5 196 47.4
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 2.3e-36 156.4 185 48.6
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 2.5e-35 152.9 136 52.9
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 2.6e-32 142.9 194 45.4
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 2.2e-31 139.8 185 45.4
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.6e-29 132.1 108 63.0
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 6.0e-29 131.7 165 44.2
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 3.9e-28 129.0 87 66.7
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 7.3e-27 124.8 89 68.5
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 7.3e-27 124.8 101 59.4
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.2e-26 124.0 99 62.6
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 8.4e-23 111.3 134 41.0
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 6.0e-21 105.1 130 38.5
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.3e-20 103.2 87 62.1
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.1e-18 94.7 66 71.2
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.4e-17 94.0 75 60.0
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.0e-12 76.3 106 44.3
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 7.3e-11 71.6 108 32.4
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 4.5e-08 62.4 46 73.9
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 5.8e-08 62.0 49 69.4
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 4.2e-06 55.8 41 58.5


User provided reference genes

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