Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 4.2e-72 274.6 144 100.0
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 8.9e-54 213.8 144 72.2
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 8.9e-54 213.8 144 72.2
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 2.6e-53 212.2 141 76.6
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 7.5e-53 210.7 141 75.9
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 2.9e-52 208.8 144 73.6
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.2e-50 203.4 132 77.3
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 1.2e-50 203.4 144 70.8
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 2.3e-49 199.1 132 75.8
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 7.3e-48 194.1 137 70.8
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 2.8e-47 192.2 132 69.7
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 5.2e-46 188.0 142 69.0
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.5e-45 186.4 132 67.4
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.3e-44 183.3 142 66.9
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 1.7e-41 172.9 144 63.9
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.7e-41 172.9 144 63.9
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.7e-41 172.9 144 63.9
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 5.0e-41 171.4 138 61.6
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 1.1e-40 170.2 146 62.3
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.3e-40 167.5 143 62.9
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 7.3e-40 167.5 144 61.1
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 9.5e-40 167.2 138 60.9
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.6e-39 165.2 144 57.6
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 4.7e-39 164.9 99 87.9
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 4.7e-39 164.9 144 61.1
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 6.8e-38 161.0 121 65.3
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 6.8e-38 161.0 141 57.4
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.2e-37 160.2 130 66.2
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 2.0e-37 159.5 123 66.7
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 3.4e-37 158.7 134 59.7
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 4.4e-37 158.3 141 58.9
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.7e-36 156.4 117 62.4
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 6.4e-36 154.5 142 55.6
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 8.3e-36 154.1 122 63.1
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.4e-35 153.3 144 56.9
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.9e-35 152.9 144 56.9
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.4e-35 152.5 131 61.1
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 2.4e-35 152.5 120 62.5
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 3.2e-35 152.1 144 56.9
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 2.1e-34 149.4 115 66.1
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 3.5e-34 148.7 132 61.4
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 6.0e-34 147.9 113 61.9
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 7.8e-34 147.5 115 63.5
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.3e-33 146.0 113 60.2
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 5.1e-33 144.8 113 61.9
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 6.6e-33 144.4 117 59.8
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 6.6e-33 144.4 135 57.0
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 4.3e-32 141.7 119 58.0
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 2.1e-31 139.4 125 55.2
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 3.6e-31 138.7 121 58.7
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 3.6e-31 138.7 118 59.3
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.1e-30 137.1 129 55.8
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.4e-30 136.7 127 57.5
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.4e-30 136.7 120 61.7
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.8e-30 136.3 127 56.7
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 3.1e-30 135.6 133 53.4
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 5.2e-30 134.8 114 59.6
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 5.2e-30 134.8 127 55.9
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 5.2e-30 134.8 137 49.6
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 8.9e-30 134.0 114 58.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.0e-29 132.9 122 58.2
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 4.4e-29 131.7 122 55.7
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 5.8e-29 131.3 127 53.5
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.8e-29 131.3 126 55.6
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 9.9e-29 130.6 145 49.0
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 9.9e-29 130.6 129 55.0
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.3e-28 130.2 101 61.4
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 1.3e-28 130.2 126 54.8
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 2.9e-28 129.0 129 54.3
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 3.8e-28 128.6 129 55.0
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 6.4e-28 127.9 125 55.2
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.4e-27 126.7 122 57.4
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 1.9e-27 126.3 127 55.9
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.9e-27 126.3 111 55.9
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 3.2e-27 125.6 115 58.3
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 4.1e-27 125.2 127 55.1
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 4.1e-27 125.2 115 58.3
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 4.1e-27 125.2 84 71.4
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.6e-26 123.2 146 50.0
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.6e-26 123.2 127 54.3
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 1.6e-26 123.2 100 63.0
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 3.5e-26 122.1 142 48.6
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.7e-25 119.8 129 48.1
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.7e-25 119.8 129 48.1
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 5.6e-24 114.8 111 53.2
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.1e-22 110.5 117 56.4
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.1e-22 110.5 93 58.1
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.4e-22 109.4 126 49.2
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 6.9e-22 107.8 71 74.6
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 9.0e-22 107.5 112 49.1
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 5.8e-21 104.8 95 58.9
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 5.8e-21 104.8 120 45.0
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 1.3e-20 103.6 119 50.4
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.9e-19 99.8 151 42.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.6e-18 96.7 141 41.8
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 2.1e-18 96.3 131 42.0
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 2.7e-18 95.9 120 46.7
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 7.8e-18 94.4 141 41.8
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.0e-17 92.4 141 41.8
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 5.1e-17 91.7 71 60.6
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.5e-16 90.1 122 45.9
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 7.3e-16 87.8 102 52.0
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 9.6e-16 87.4 120 42.5
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 9.9e-13 77.4 115 38.3
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 2.9e-12 75.9 133 38.3
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.4e-11 73.6 64 51.6
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 4.2e-11 72.0 69 47.8
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 7.4e-08 61.2 105 34.3
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 1.3e-07 60.5 121 39.7


User provided reference genes

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