Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0012364 Lotus japonicus HOM05D000056 ORTHO05D000019 4.8e-151 537.7 259 100.0
Psat4g189320 Pisum sativum HOM05D000056 ORTHO05D000019 6.1e-29 132.1 257 29.2
arahy.Tifrunner.gnm1.ann1.634HM0 Arachis hypogaea HOM05D000056 ORTHO05D000019 4.4e-27 125.9 254 31.1
Glyma.10G266500 Glycine max HOM05D000056 ORTHO05D000019 4.8e-26 122.5 250 29.6
Medtr8g037923 Medicago truncatula HOM05D000056 ORTHO05D000019 2.7e-24 116.7 265 29.8
Medtr8g042170 Medicago truncatula HOM05D000056 ORTHO05D000019 7.7e-24 115.2 253 28.9
arahy.Tifrunner.gnm1.ann1.I7S5UQ Arachis hypogaea HOM05D000056 ORTHO05D000019 1.0e-23 114.8 283 28.6
arahy.Tifrunner.gnm1.ann1.S3AGIE Arachis hypogaea HOM05D000056 ORTHO05D000019 4.2e-22 109.4 281 29.2
arahy.Tifrunner.gnm1.ann1.DLDD1G Arachis hypogaea HOM05D000056 ORTHO05D000019 7.2e-22 108.6 252 29.4
Lalb_Chr18g0054601 Lupinus albus HOM05D000056 ORTHO05D000019 1.6e-21 107.5 288 27.1
arahy.Tifrunner.gnm1.ann1.M5D4GE Arachis hypogaea HOM05D000056 ORTHO05D000019 2.7e-21 106.7 250 27.6
arahy.Tifrunner.gnm1.ann1.HDLN9F Arachis hypogaea HOM05D000056 ORTHO05D000019 4.7e-21 105.9 254 28.7
Medtr8g037920 Medicago truncatula HOM05D000056 ORTHO05D000019 1.4e-20 104.4 259 29.0
arahy.Tifrunner.gnm1.ann1.5352LF Arachis hypogaea HOM05D000056 ORTHO05D000019 1.8e-20 104.0 270 29.3
Lalb_Chr03g0031941 Lupinus albus HOM05D000056 ORTHO05D000019 6.8e-20 102.1 292 27.7
arahy.Tifrunner.gnm1.ann1.U5GM9Y Arachis hypogaea HOM05D000056 ORTHO05D000019 1.5e-19 100.9 252 29.0
Medtr8g042400 Medicago truncatula HOM05D000056 ORTHO05D000019 2.6e-19 100.1 222 29.3
Ca_24053_v3 Cicer arietinum L. HOM05D000056 ORTHO05D000019 5.7e-19 99.0 223 30.5
arahy.Tifrunner.gnm1.ann1.Y95K56 Arachis hypogaea HOM05D000056 ORTHO05D000019 1.1e-17 94.7 247 27.5
Ca_24056_v3 Cicer arietinum L. HOM05D000056 ORTHO05D000019 9.1e-17 91.7 203 27.1
arahy.Tifrunner.gnm1.ann1.E1C9SY Arachis hypogaea HOM05D000056 ORTHO05D000019 2.3e-15 87.0 195 33.3
arahy.Tifrunner.gnm1.ann1.DJY3YQ Arachis hypogaea HOM05D000056 ORTHO05D000019 3.8e-15 86.3 237 29.1
arahy.Tifrunner.gnm1.ann1.5JI1SX Arachis hypogaea HOM05D000056 ORTHO05D000019 2.5e-14 83.6 256 27.0
arahy.Tifrunner.gnm1.ann1.9WQW1N Arachis hypogaea HOM05D000056 ORTHO05D000019 2.1e-13 80.5 182 30.8
arahy.Tifrunner.gnm1.ann1.79I5W7 Arachis hypogaea HOM05D000056 ORTHO05D000019 1.8e-12 77.4 175 31.4
Glyma.03G027000 Glycine max HOM05D000056 ORTHO05D000019 1.8e-12 77.4 272 26.1
Medtr7g060115 Medicago truncatula HOM05D000056 ORTHO05D000019 3.0e-12 76.6 274 23.0
arahy.Tifrunner.gnm1.ann1.55DM45 Arachis hypogaea HOM05D000056 ORTHO05D000019 4.0e-12 76.3 172 30.2
arahy.Tifrunner.gnm1.ann1.P6HZY0 Arachis hypogaea HOM05D000056 ORTHO05D000019 4.0e-12 76.3 163 28.2
CANSAT80G0123 Cannabis sativa HOM05D000056 ORTHO05D000019 4.0e-12 76.3 264 25.4
Duzib212G0459 Durio zibethinus HOM05D000056 ORTHO05D000019 5.2e-12 75.9 236 31.4
Duzib128G0681 Durio zibethinus HOM05D000056 ORTHO05D000019 8.9e-12 75.1 260 28.1
Thecc.05G141000 Theobroma cacao HOM05D000056 ORTHO05D000019 2.0e-11 73.9 253 26.1
Medtr7g060020 Medicago truncatula HOM05D000056 ORTHO05D000019 5.7e-11 72.4 260 25.8
arahy.Tifrunner.gnm1.ann1.7V5P5V Arachis hypogaea HOM05D000056 ORTHO05D000019 9.8e-11 71.6 177 31.1
Cfa016714 Carpinus fangiana HOM05D000056 ORTHO05D000019 2.2e-10 70.5 258 25.6
Duzib212G0028 Durio zibethinus HOM05D000056 ORTHO05D000019 2.2e-10 70.5 254 26.8
Medtr7g060160 Medicago truncatula HOM05D000056 ORTHO05D000019 2.8e-10 70.1 233 24.5
CANSAT80G1272 Cannabis sativa HOM05D000056 ORTHO05D000019 6.3e-10 68.9 155 30.3
Medtr7g059540 Medicago truncatula HOM05D000056 ORTHO05D000019 6.3e-10 68.9 292 23.3
CANSAT11G0177 Cannabis sativa HOM05D000056 ORTHO05D000019 8.3e-10 68.6 241 28.6
CANSAT11G2204 Cannabis sativa HOM05D000056 ORTHO05D000019 8.3e-10 68.6 241 28.6
Ca_21516_v3 Cicer arietinum L. HOM05D000056 ORTHO05D000019 8.3e-10 68.6 122 33.6
Cfa016717 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.1e-09 68.2 227 26.4
VMungo0464G0160 Vigna mungo HOM05D000056 ORTHO05D000019 1.1e-09 68.2 262 27.1
Cfa016724 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.4e-09 67.8 224 26.8
Duzib212G0148 Durio zibethinus HOM05D000056 ORTHO05D000019 1.4e-09 67.8 257 26.5
Medtr8g042080 Medicago truncatula HOM05D000056 ORTHO05D000019 1.8e-09 67.4 104 30.8
QL07p012281 Quercus lobata HOM05D000056 ORTHO05D000019 1.8e-09 67.4 231 25.1
GSVIVG01033580001 Vitis vinifera HOM05D000056 ORTHO05D000019 3.2e-09 66.6 130 31.5
COL.COLO4_33944 Corchorus olitorius HOM05D000056 ORTHO05D000019 5.4e-09 65.9 227 26.4
Gohir.D13G002300 Gossypium hirsutum HOM05D000056 ORTHO05D000019 5.4e-09 65.9 251 26.3
Medtr7g060320 Medicago truncatula HOM05D000056 ORTHO05D000019 9.2e-09 65.1 190 26.3
QL07p012272 Quercus lobata HOM05D000056 ORTHO05D000019 9.2e-09 65.1 235 23.8
Haze_19733 Corylus avellana HOM05D000056 ORTHO05D000019 2.0e-08 63.9 213 27.2
Duzib128G0330 Durio zibethinus HOM05D000056 ORTHO05D000019 2.0e-08 63.9 257 25.7
Gohir.A04G063500 Gossypium hirsutum HOM05D000056 ORTHO05D000019 2.7e-08 63.5 258 24.0
Phvul.004G055000 Phaseolus vulgaris HOM05D000056 ORTHO05D000019 2.7e-08 63.5 172 27.3
Gohir.D04G100500 Gossypium hirsutum HOM05D000056 ORTHO05D000019 3.5e-08 63.2 260 23.8
QL07p006690 Quercus lobata HOM05D000056 ORTHO05D000019 3.5e-08 63.2 249 26.1
Sabra16G0043200 Salix brachista HOM05D000056 ORTHO05D000019 3.5e-08 63.2 242 21.1
Cfa016711 Carpinus fangiana HOM05D000056 ORTHO05D000019 4.5e-08 62.8 229 28.8
Duzib056G0003 Durio zibethinus HOM05D000056 ORTHO05D000019 4.5e-08 62.8 246 24.4
Medtr7g060840 Medicago truncatula HOM05D000056 ORTHO05D000019 4.5e-08 62.8 258 22.9
QL07p007168 Quercus lobata HOM05D000056 ORTHO05D000019 4.5e-08 62.8 123 30.1
VMungo0464G1788 Vigna mungo HOM05D000056 ORTHO05D000019 4.5e-08 62.8 112 32.1
Cfa016720 Carpinus fangiana HOM05D000056 ORTHO05D000019 5.9e-08 62.4 225 27.6
Gohir.D13G002400 Gossypium hirsutum HOM05D000056 ORTHO05D000019 7.8e-08 62.0 254 28.0
Medtr7g059810 Medicago truncatula HOM05D000056 ORTHO05D000019 1.0e-07 61.6 194 27.8
Cfa016716 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.3e-07 61.2 229 27.1
Medtr7g060260 Medicago truncatula HOM05D000056 ORTHO05D000019 1.3e-07 61.2 123 29.3
Atru.chr1.1480 Acer truncatum HOM05D000056 ORTHO05D000019 1.7e-07 60.8 174 29.9
Cfa016718 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.7e-07 60.8 230 26.1
Glyma.16G149000 Glycine max HOM05D000056 ORTHO05D000019 2.3e-07 60.5 120 30.8
Gohir.A13G002300 Gossypium hirsutum HOM05D000056 ORTHO05D000019 2.9e-07 60.1 248 25.0
Gorai.009G403500 Gossypium raimondii HOM05D000056 ORTHO05D000019 2.9e-07 60.1 233 23.2
Thecc.05G140100 Theobroma cacao HOM05D000056 ORTHO05D000019 2.9e-07 60.1 229 25.8
TPR.G7736 Trifolium pratense HOM05D000056 ORTHO05D000019 3.9e-07 59.7 144 27.1
Cfa016712 Carpinus fangiana HOM05D000056 ORTHO05D000019 5.0e-07 59.3 242 24.8
CiPaw.10G038300 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.0e-07 59.3 219 27.4
Haze_19723 Corylus avellana HOM05D000056 ORTHO05D000019 5.0e-07 59.3 166 25.9
Medtr7g059480 Medicago truncatula HOM05D000056 ORTHO05D000019 5.0e-07 59.3 124 29.8
Thecc.10G021300 Theobroma cacao HOM05D000056 ORTHO05D000019 5.0e-07 59.3 233 25.3
Phvul.004G068700 Phaseolus vulgaris HOM05D000056 ORTHO05D000019 6.6e-07 58.9 257 24.1
QL04p027572 Quercus lobata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 81 37.0
QL07p004412 Quercus lobata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 84 40.5
QL07p007225 Quercus lobata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 84 38.1
TPR.G31279 Trifolium pratense HOM05D000056 ORTHO05D000019 6.6e-07 58.9 144 29.9
Cfa016723 Carpinus fangiana HOM05D000056 ORTHO05D000019 8.6e-07 58.5 194 26.8
Dinv30297 Davidia involucrata HOM05D000056 ORTHO05D000019 8.6e-07 58.5 215 22.3
Glyma.19G074300 Glycine max HOM05D000056 ORTHO05D000019 8.6e-07 58.5 116 30.2
Sed0013590 Sechium edule HOM05D000056 ORTHO05D000019 8.6e-07 58.5 114 29.8
QL07p006831 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-06 58.2 81 38.3
QL07p012196 Quercus lobata HOM05D000056 ORTHO05D000019 1.1e-06 58.2 136 28.7
Thecc.05G140000 Theobroma cacao HOM05D000056 ORTHO05D000019 1.1e-06 58.2 231 26.0
TPR.G4436 Trifolium pratense HOM05D000056 ORTHO05D000019 1.1e-06 58.2 125 32.0
CiPaw.09G181400 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.9e-06 57.4 194 23.2
Medtr7g060310 Medicago truncatula HOM05D000056 ORTHO05D000019 1.9e-06 57.4 142 28.9
Nitab4.5_0000515g0170 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.9e-06 57.4 85 28.2
QL07p007092 Quercus lobata HOM05D000056 ORTHO05D000019 1.9e-06 57.4 81 37.0
QL07p007456 Quercus lobata HOM05D000056 ORTHO05D000019 1.9e-06 57.4 84 36.9
Glyma.05G076400 Glycine max HOM05D000056 ORTHO05D000019 3.3e-06 56.6 116 29.3
Psat7g181160 Pisum sativum HOM05D000056 ORTHO05D000019 3.3e-06 56.6 258 23.6
QL07p007599 Quercus lobata HOM05D000056 ORTHO05D000019 3.3e-06 56.6 84 38.1
Sed0008146 Sechium edule HOM05D000056 ORTHO05D000019 3.3e-06 56.6 207 24.6
PGSC0003DMG400008157 Solanum tuberosum HOM05D000056 ORTHO05D000019 3.3e-06 56.6 84 28.6
Haze_19722 Corylus avellana HOM05D000056 ORTHO05D000019 5.6e-06 55.8 134 30.6
Glyma.05G076600 Glycine max HOM05D000056 ORTHO05D000019 5.6e-06 55.8 112 30.4
Lj1C1107T7 Lonicera japonica HOM05D000056 ORTHO05D000019 5.6e-06 55.8 237 21.5
Medtr7g446270 Medicago truncatula HOM05D000056 ORTHO05D000019 5.6e-06 55.8 147 29.3
Nn7g37233 Nelumbo nucifera HOM05D000056 ORTHO05D000019 5.6e-06 55.8 77 32.5
QL07p012204 Quercus lobata HOM05D000056 ORTHO05D000019 5.6e-06 55.8 142 26.8
Cfa016721 Carpinus fangiana HOM05D000056 ORTHO05D000019 7.3e-06 55.5 138 30.4
CiPaw.09G171900 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.3e-06 55.5 185 22.7
QL07p006658 Quercus lobata HOM05D000056 ORTHO05D000019 7.3e-06 55.5 184 27.7
Solyc10g079520.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 7.3e-06 55.5 84 28.6
Sopen10g030170 Solanum pennellii HOM05D000056 ORTHO05D000019 7.3e-06 55.5 84 28.6
Dinv03866 Davidia involucrata HOM05D000056 ORTHO05D000019 9.5e-06 55.1 255 23.1
Dinv13801 Davidia involucrata HOM05D000056 ORTHO05D000019 9.5e-06 55.1 152 29.6
Medtr7g060370 Medicago truncatula HOM05D000056 ORTHO05D000019 9.5e-06 55.1 124 29.8
Peaxi162Scf01029g00420 Petunia axillaris HOM05D000056 ORTHO05D000019 9.5e-06 55.1 84 26.2


User provided reference genes

Program Settings