Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0011036 Lotus japonicus HOM05D003336 ORTHO05D003807 5.1e-44 180.6 88 100.0
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 4.5e-08 61.2 47 66.0
Dinv22743 Davidia involucrata HOM05D003336 ORTHO05D003807 7.7e-08 60.5 36 75.0
Ca_10458_v3 Cicer arietinum L. HOM05D003336 ORTHO05D003807 1.0e-07 60.1 37 75.7
Lalb_Chr09g0333021 Lupinus albus HOM05D003336 ORTHO05D003807 1.0e-07 60.1 42 66.7
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Aqoxy1G02652 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 1.7e-07 59.3 36 75.0
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
CSS0038429 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 1.7e-07 59.3 48 62.5
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.7e-07 59.3 42 69.0
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.7e-07 59.3 42 69.0
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 1.7e-07 59.3 48 62.5
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Lj6C18T11 Lonicera japonica HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 1.7e-07 59.3 28 92.9
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 1.7e-07 59.3 34 79.4
Peaxi162Scf00108g01317 Petunia axillaris HOM05D003336 ORTHO05D003807 2.2e-07 58.9 34 79.4
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 2.2e-07 58.9 34 79.4
vmacro00616 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 2.2e-07 58.9 34 79.4
vmacro00649 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 2.2e-07 58.9 34 79.4
GSVIVG01010779001 Vitis vinifera HOM05D003336 ORTHO05D003807 2.2e-07 58.9 34 79.4
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 2.9e-07 58.5 34 76.5
Actinidia35985 Actinidia chinensis HOM05D003336 ORTHO05D003807 2.9e-07 58.5 33 81.8
Actinidia35987 Actinidia chinensis HOM05D003336 ORTHO05D003807 2.9e-07 58.5 33 81.8
Haze_21691 Corylus avellana HOM05D003336 ORTHO05D003807 2.9e-07 58.5 33 81.8
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 2.9e-07 58.5 34 76.5
Lalb_Chr05g0230051 Lupinus albus HOM05D003336 ORTHO05D003807 2.9e-07 58.5 27 96.3
MBI01_g10303_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 2.9e-07 58.5 33 81.8
Nitab4.5_0000233g0220 Nicotiana tabacum HOM05D003336 ORTHO05D003807 2.9e-07 58.5 33 81.8
Cfa013247 Carpinus fangiana HOM05D003336 ORTHO05D003807 3.8e-07 58.2 33 78.8
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 3.8e-07 58.2 34 76.5
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 3.8e-07 58.2 34 76.5
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 3.8e-07 58.2 34 76.5
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 5.0e-07 57.8 34 76.5
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
CSS0035259 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.5e-07 57.4 37 73.0
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 6.5e-07 57.4 34 76.5
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
Cc04_g08960 Coffea canephora HOM05D003336 ORTHO05D003807 8.5e-07 57.0 36 72.2
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
SalBow1G0055 Salvia bowleyana HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
SalBow1G1314 Salvia bowleyana HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 8.5e-07 57.0 34 76.5
CDE02G0747 Ceratophyllum demersum HOM05D003336 ORTHO05D003807 1.1e-06 56.6 33 78.8
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 1.1e-06 56.6 34 73.5
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 1.1e-06 56.6 34 73.5
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 1.1e-06 56.6 34 73.5
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 1.1e-06 56.6 33 78.8
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 1.4e-06 56.2 34 76.5
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.4e-06 56.2 27 88.9
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 1.4e-06 56.2 34 73.5
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 1.4e-06 56.2 34 73.5
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 1.9e-06 55.8 34 73.5
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 2.5e-06 55.5 34 70.6
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 3.2e-06 55.1 33 75.8
CSS0005877 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.2e-06 55.1 64 48.4
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 3.2e-06 55.1 34 73.5
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 3.2e-06 55.1 34 73.5
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 3.2e-06 55.1 34 70.6
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 5.5e-06 54.3 28 82.1
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 7.2e-06 53.9 34 70.6
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 9.4e-06 53.5 34 70.6


User provided reference genes

Program Settings