Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 7.4e-53 210.7 142 100.0
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 2.4e-35 152.5 146 74.7
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 5.0e-33 144.8 142 71.8
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 5.0e-33 144.8 137 73.7
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 4.0e-30 135.2 142 73.2
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 2.2e-28 129.4 146 71.9
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 2.8e-28 129.0 138 73.2
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 2.4e-27 125.9 96 85.4
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 1.3e-25 120.2 131 68.7
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 5.0e-25 118.2 138 64.5
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 8.5e-25 117.5 136 64.7
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 2.5e-24 115.9 119 77.3
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 4.2e-24 115.2 96 85.4
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 4.2e-24 115.2 97 85.6
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 5.5e-24 114.8 136 64.0
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 7.2e-24 114.4 143 62.2
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 9.4e-24 114.0 96 84.4
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 2.1e-23 112.8 152 61.2
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 1.8e-22 109.8 136 62.5
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 4.0e-22 108.6 92 84.8
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 5.2e-22 108.2 91 82.4
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 2.6e-21 105.9 160 57.5
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 4.4e-21 105.1 91 75.8
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 4.4e-21 105.1 88 85.2
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 5.7e-21 104.8 135 63.0
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 5.7e-21 104.8 119 67.2
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 7.5e-21 104.4 133 63.2
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 1.3e-20 103.6 96 76.0
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 1.7e-20 103.2 132 63.6
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.7e-20 103.2 132 63.6
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.7e-20 103.2 89 80.9
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.7e-20 103.2 89 80.9
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 2.2e-20 102.8 137 68.6
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 3.1e-19 99.0 93 80.6
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 4.1e-19 98.6 140 57.9
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 4.1e-19 98.6 87 86.2
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 1.2e-18 97.1 120 71.7
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 2.7e-18 95.9 84 85.7
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 3.5e-18 95.5 94 75.5
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 3.5e-18 95.5 90 77.8
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 3.5e-18 95.5 93 78.5
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 4.5e-18 95.1 89 79.8
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 5.9e-18 94.7 86 84.9
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 5.9e-18 94.7 86 84.9
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 1.3e-17 93.6 99 72.7
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 1.7e-17 93.2 87 82.8
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-17 93.2 84 84.5
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 1.7e-17 93.2 97 76.3
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 2.3e-17 92.8 95 74.7
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 2.3e-17 92.8 90 76.7
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 2.3e-17 92.8 135 63.7
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 3.8e-17 92.0 98 75.5
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 1.9e-16 89.7 83 84.3
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.5e-16 89.4 83 83.1
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 3.3e-16 89.0 93 74.2
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 3.3e-16 89.0 96 76.0
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 3.3e-16 89.0 89 76.4
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 7.2e-16 87.8 98 73.5
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-15 87.0 86 80.2
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 1.2e-15 87.0 86 80.2
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 2.1e-15 86.3 102 68.6
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 6.1e-15 84.7 84 78.6
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.0e-14 84.0 91 74.7
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 1.4e-14 83.6 86 76.7
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.8e-14 83.2 94 70.2
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 4.0e-14 82.0 102 68.6
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 5.2e-14 81.6 84 78.6
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 1.2e-13 80.5 81 79.0
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 1.2e-13 80.5 86 75.6
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 1.5e-13 80.1 92 72.8
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 2.0e-13 79.7 82 48.8
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 2.0e-13 79.7 99 69.7
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 2.6e-13 79.3 47 76.6
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 1.7e-12 76.6 86 74.4
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 2.2e-12 76.3 76 59.2
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 4.9e-12 75.1 89 68.5
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 6.3e-12 74.7 94 71.3
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 2.4e-11 72.8 97 67.0
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 1.6e-10 70.1 90 66.7
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 2.0e-10 69.7 97 63.9
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 3.5e-10 68.9 90 66.7
unitig_744.g24534 Utricularia gibba HOM05D007781 ORTHO05D009769 1.0e-09 67.4 85 67.1
Ca_18542_v3 Cicer arietinum L. HOM05D021202 ORTHO05D009769 1.3e-09 67.0 95 41.1
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 2.3e-09 66.2 100 65.0
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 2.9e-09 65.9 36 80.6
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 1.1e-08 63.9 40 67.5
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 2.5e-08 62.8 42 69.0
Cfa000439 Carpinus fangiana HOM05D007781 ORTHO05D009769 3.3e-08 62.4 90 38.9
MELO3C007039.2 Cucumis melo HOM05D002138 ORTHO05D002106 1.6e-07 60.1 88 61.4
Gohir.A11G117400 Gossypium hirsutum HOM05D007781 ORTHO05D009769 3.6e-07 58.9 35 68.6
Sed0017721 Sechium edule HOM05D007781 ORTHO05D009769 3.6e-07 58.9 39 64.1
vmacro14163 Vaccinium macrocarpon HOM05D007781 ORTHO05D009769 6.1e-07 58.2 39 61.5
DCAR_008280 Daucus carota HOM05D002138 ORTHO05D002106 8.0e-07 57.8 46 54.3
vmacro00338 Vaccinium macrocarpon HOM05D007781 ORTHO05D002106 1.0e-06 57.4 48 52.1
TAR075G0006 Trochodendron aralioides HOM05D007781 ORTHO05D002106 3.0e-06 55.8 73 67.1
Cpa.g.sc832.2 Carica papaya HOM05D002138 ORTHO05D002106 5.2e-06 55.1 90 57.8
Thhalv10026533m.g Eutrema salsugineum HOM05D002138 ORTHO05D002106 5.2e-06 55.1 39 56.4
TAR627G0773 Trochodendron aralioides HOM05D002138 ORTHO05D002106 6.8e-06 54.7 85 63.5


User provided reference genes

Program Settings