Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 4.1e-86 321.2 151 100.0
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.3e-60 236.5 154 73.4
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 5.1e-60 234.6 148 77.7
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.9e-59 232.6 150 74.7
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 5.6e-59 231.1 153 71.9
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 1.3e-58 229.9 146 74.0
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 2.4e-57 225.7 151 70.2
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 6.2e-50 201.1 155 64.5
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 6.2e-50 201.1 155 64.5
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.0e-47 193.7 145 62.8
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 4.9e-47 191.4 153 60.1
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.6e-45 186.4 157 58.0
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 2.7e-45 185.7 150 64.0
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 3.5e-45 185.3 150 60.0
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 4.6e-45 184.9 149 61.1
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 7.9e-45 184.1 150 59.3
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 7.9e-45 184.1 136 63.2
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 1.3e-44 183.3 134 61.9
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.3e-44 183.3 149 58.4
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 5.1e-44 181.4 153 56.9
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.5e-43 179.9 143 60.8
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.6e-42 176.4 141 58.9
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 2.1e-42 176.0 135 61.5
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.8e-42 175.6 133 60.2
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.8e-42 175.6 133 60.2
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 3.7e-42 175.3 135 63.0
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 3.7e-42 175.3 158 55.7
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 3.7e-42 175.3 155 56.1
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 4.8e-42 174.9 139 59.0
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 6.3e-42 174.5 144 55.6
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 8.2e-42 174.1 137 59.9
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 1.4e-41 173.3 147 57.8
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.4e-41 173.3 146 55.5
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.8e-41 172.9 155 56.1
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 2.4e-41 172.6 147 56.5
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 2.4e-41 172.6 161 54.0
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.4e-41 172.6 162 53.1
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 4.1e-41 171.8 161 53.4
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 4.1e-41 171.8 135 61.5
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 6.9e-41 171.0 139 60.4
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 9.0e-41 170.6 134 60.4
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 9.0e-41 170.6 143 55.2
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.2e-40 170.2 161 52.8
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 2.6e-40 169.1 144 54.9
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 3.4e-40 168.7 133 56.4
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 3.4e-40 168.7 141 58.9
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 3.4e-40 168.7 135 60.7
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 7.6e-40 167.5 136 59.6
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.0e-39 167.2 134 60.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 1.0e-39 167.2 123 61.8
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 1.0e-39 167.2 143 55.2
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 1.0e-39 167.2 144 56.2
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.7e-39 166.4 152 53.3
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.2e-39 166.0 137 55.5
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 2.2e-39 166.0 142 57.0
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.9e-39 165.6 136 59.6
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 2.9e-39 165.6 166 51.2
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.9e-39 165.6 135 60.0
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 3.8e-39 165.2 139 54.7
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.8e-39 165.2 161 50.9
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 5.0e-39 164.9 139 54.7
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 6.5e-39 164.5 137 56.2
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 8.5e-39 164.1 126 59.5
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.1e-38 163.7 161 50.9
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.1e-38 163.7 133 55.6
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.4e-38 163.3 123 62.6
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 2.5e-38 162.5 137 54.0
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 3.2e-38 162.2 137 57.7
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 4.2e-38 161.8 139 53.2
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 7.2e-38 161.0 139 53.2
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 7.2e-38 161.0 158 51.9
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.2e-37 160.2 139 52.5
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 1.2e-37 160.2 139 51.8
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.2e-37 160.2 137 56.9
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.6e-37 159.8 124 58.9
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 2.1e-37 159.5 139 51.8
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 4.6e-37 158.3 158 51.3
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 4.6e-37 158.3 140 53.6
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 7.9e-37 157.5 139 51.1
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 7.9e-37 157.5 139 51.1
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 7.9e-37 157.5 139 51.1
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.0e-36 157.1 139 51.1
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.0e-36 157.1 139 51.1
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.3e-36 156.8 158 51.3
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.9e-36 155.2 139 50.4
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 6.7e-36 154.5 154 47.4
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 8.7e-36 154.1 124 57.3
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.8e-34 149.1 127 54.3
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.4e-33 146.7 138 53.6
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 2.4e-33 146.0 148 50.7
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.2e-32 143.7 155 45.2
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 5.9e-32 141.4 138 53.6
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.0e-31 140.6 131 55.7
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.6e-29 133.3 109 57.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 1.0e-28 130.6 105 60.0
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 2.0e-27 126.3 135 49.6
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 9.7e-27 124.0 153 44.4
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 9.7e-27 124.0 124 48.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 6.3e-26 121.3 151 46.4
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.4e-25 119.4 106 51.9
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 5.3e-25 118.2 144 45.1
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 2.0e-24 116.3 123 45.5
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 2.9e-23 112.5 161 36.6
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.5e-22 108.2 88 58.0
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 7.2e-22 107.8 134 40.3
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.3e-19 99.0 83 53.0
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 1.1e-17 94.0 81 56.8
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 7.7e-16 87.8 123 38.2
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.7e-15 86.7 129 38.0
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 2.2e-15 86.3 78 59.0
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 1.5e-14 83.6 100 42.0
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 5.5e-14 81.6 197 28.9
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.1e-13 79.7 61 57.4
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 5.2e-12 75.1 58 62.1
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.4e-09 66.2 75 45.3
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 4.5e-08 62.0 129 32.6
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 4.5e-08 62.0 97 36.1
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 8.5e-07 57.8 51 51.0


User provided reference genes

Program Settings