Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0008198 Lotus japonicus HOM05D013061 ORTHO05D001207 7.7e-89 330.5 171 100.0
Glyma.17G035600 Glycine max HOM05D013061 ORTHO05D001207 1.5e-47 193.4 184 60.3
Psat4g021840 Pisum sativum HOM05D013061 ORTHO05D001207 8.1e-46 187.6 188 57.4
TPR.G25403 Trifolium pratense HOM05D013061 ORTHO05D001207 8.1e-46 187.6 190 57.4
Medtr4g122660 Medicago truncatula HOM05D001578 ORTHO05D001207 1.4e-45 186.8 180 56.7
Phvul.003G116500 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 3.2e-42 175.6 188 53.2
Ca_21426_v3 Cicer arietinum L. HOM05D013061 ORTHO05D001207 7.3e-39 164.5 126 67.5
Lalb_Chr15g0089141 Lupinus albus HOM05D013061 ORTHO05D019266 3.6e-30 135.6 188 43.6
Medtr2g033720 Medicago truncatula HOM05D013061 ORTHO05D019266 2.2e-19 99.8 198 36.4
Medtr2g033740 Medicago truncatula HOM05D013061 ORTHO05D019266 1.9e-15 86.7 190 34.2
Psat1g162240 Pisum sativum HOM05D013061 ORTHO05D019266 1.2e-12 77.4 183 29.5
Ca_21409_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 2.0e-12 76.6 149 30.2
Ca_21424_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 2.0e-12 76.6 149 30.2
Ca_21425_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 2.6e-12 76.3 149 30.2
TPR.G33859 Trifolium pratense HOM05D013061 ORTHO05D019266 1.0e-11 74.3 193 28.0
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 8.4e-11 71.2 174 29.9
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 8.4e-11 71.2 183 28.4
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.2e-09 67.4 151 29.1
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.5e-09 65.9 181 28.2
Gorai.011G202200 Gossypium raimondii HOM05D001578 ORTHO05D001207 3.5e-09 65.9 147 29.9
Sc12g0010290 Simmondsia chinensis HOM05D001578 ORTHO05D001207 4.6e-09 65.5 168 29.8
Lj4g0009388 Lotus japonicus HOM05D001578 ORTHO05D001207 6.1e-09 65.1 152 29.6
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.0e-08 64.3 151 28.5
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.0e-08 64.3 151 28.5
Lj6g0025245 Lotus japonicus HOM05D013061 ORTHO05D019266 1.0e-08 64.3 186 31.2
MSTRG.16314 Avicennia marina HOM05D001578 ORTHO05D001207 2.3e-08 63.2 159 27.0
Gohir.A10G174100 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.9e-08 62.4 181 28.7
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 6.7e-08 61.6 158 26.6
Gohir.D10G180700 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.7e-08 61.6 181 28.2
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 8.7e-08 61.2 178 27.5
Ciclev10006511m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.9e-07 60.1 147 25.9
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 1.9e-07 60.1 186 25.3
TPR.G33856 Trifolium pratense HOM05D013061 ORTHO05D019266 3.3e-07 59.3 148 29.1
A06p04790 Brassica napus HOM05D001578 ORTHO05D001207 4.3e-07 58.9 159 24.5
Solyc12g099210.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 4.3e-07 58.9 163 27.0
BraA06t23683Z Brassica rapa HOM05D001578 ORTHO05D001207 7.4e-07 58.2 159 24.5
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 7.4e-07 58.2 165 26.7
Gohir.A10G174050 Gossypium hirsutum HOM05D001578 ORTHO05D001207 7.4e-07 58.2 141 30.5
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 9.7e-07 57.8 174 28.2
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 9.7e-07 57.8 165 25.5
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 9.7e-07 57.8 165 25.5
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 9.7e-07 57.8 180 28.9
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.3e-06 57.4 158 27.2
MD16G1150200 Malus domestica HOM05D001578 ORTHO05D001207 1.6e-06 57.0 170 28.2
Sopen12g033880 Solanum pennellii HOM05D001578 ORTHO05D001207 1.6e-06 57.0 164 26.2
Medtr4g122800 Medicago truncatula HOM05D001578 ORTHO05D001207 2.2e-06 56.6 184 24.5
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 2.8e-06 56.2 159 23.9
Manes.02G201700 Manihot esculenta HOM05D001578 ORTHO05D001207 2.8e-06 56.2 167 24.0
BcaC08g42990 Brassica carinata HOM05D001578 ORTHO05D001207 3.7e-06 55.8 159 24.5
C06p02320 Brassica napus HOM05D001578 ORTHO05D001207 3.7e-06 55.8 159 24.5
BolC6t35358H Brassica oleracea HOM05D001578 ORTHO05D001207 3.7e-06 55.8 149 24.8
Gohir.A01G035200 Gossypium hirsutum HOM05D001578 ORTHO05D001207 4.8e-06 55.5 166 26.5
Solyc12g099200.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 4.8e-06 55.5 165 26.1
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 6.3e-06 55.1 161 25.5
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 6.3e-06 55.1 179 26.8
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 6.3e-06 55.1 167 25.1
PGSC0003DMG400004618 Solanum tuberosum HOM05D001578 ORTHO05D001207 8.2e-06 54.7 163 26.4


User provided reference genes

Program Settings