Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 4.9e-134 481.1 239 100.0
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 2.7e-124 448.7 237 92.8
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 1.3e-123 446.4 237 93.7
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.8e-123 446.0 237 93.7
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 5.7e-122 441.0 239 92.5
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 1.6e-121 439.5 237 92.0
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 6.3e-121 437.6 241 90.5
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.4e-119 431.8 237 90.3
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.1e-117 426.8 236 88.6
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.4e-117 426.4 240 87.5
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.5e-117 425.6 237 89.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 4.2e-117 424.9 235 89.4
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 4.2e-117 424.9 232 90.9
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 5.5e-117 424.5 241 88.0
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 5.5e-117 424.5 240 87.9
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 7.2e-117 424.1 236 88.1
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 7.9e-116 420.6 240 86.7
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 1.4e-115 419.9 238 88.2
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.8e-115 419.5 240 86.7
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 5.1e-115 417.9 240 86.7
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 2.0e-114 416.0 227 90.7
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 3.3e-114 415.2 242 85.5
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 4.4e-114 414.8 246 85.4
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 4.4e-114 414.8 246 85.4
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 5.7e-114 414.5 238 88.7
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 5.7e-114 414.5 227 91.2
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.7e-114 414.5 240 85.8
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 5.7e-114 414.5 228 89.0
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.3e-113 413.3 237 86.9
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 1.3e-113 413.3 234 88.5
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 2.2e-113 412.5 235 86.8
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 2.2e-113 412.5 239 83.7
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 6.3e-113 411.0 225 89.8
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 3.1e-112 408.7 239 84.9
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.1e-112 408.7 237 83.5
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.3e-112 407.9 237 83.5
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 9.1e-112 407.1 240 83.3
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.5e-111 406.4 235 86.0
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.5e-111 406.4 233 86.7
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.0e-111 406.0 247 83.4
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.0e-111 406.0 242 85.1
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 4.5e-111 404.8 226 86.7
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 5.0e-110 401.4 234 86.8
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 1.4e-109 399.8 226 85.8
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.9e-109 399.4 226 85.8
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 2.5e-109 399.1 233 85.4
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 4.2e-109 398.3 226 85.4
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 6.1e-108 394.4 224 87.5
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 7.9e-108 394.0 229 85.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.0e-107 393.7 223 88.3
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.5e-106 389.8 244 81.6
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 4.4e-106 388.3 224 83.5
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 4.4e-106 388.3 224 83.5
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 1.3e-105 386.7 202 94.6
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.7e-105 386.3 244 82.0
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.7e-105 386.3 244 82.0
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.8e-105 385.6 228 83.8
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 2.8e-105 385.6 225 84.0
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 6.3e-105 384.4 241 81.3
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 8.2e-105 384.0 229 84.3
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 1.2e-103 380.2 244 77.0
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 4.5e-103 378.3 234 80.3
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 1.0e-102 377.1 241 81.3
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 2.9e-102 375.6 228 80.7
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.5e-101 373.2 235 80.0
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 7.2e-101 370.9 235 79.6
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 5.3e-96 354.8 232 75.0
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.7e-95 352.4 226 73.9
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 4.5e-95 351.7 249 73.5
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 3.8e-94 348.6 233 73.4
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 3.8e-94 348.6 228 78.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.5e-93 346.7 226 72.1
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 3.6e-92 342.0 231 73.2
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 8.0e-92 340.9 233 71.2
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 2.3e-91 339.3 225 76.9
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 4.0e-91 338.6 229 74.7
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 4.0e-91 338.6 197 84.3
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.6e-90 335.9 235 74.5
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.2e-89 332.8 198 82.3
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 3.1e-88 328.9 250 70.8
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 5.4e-88 328.2 250 69.6
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 7.2e-85 317.8 180 86.1
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 4.7e-84 315.1 199 79.4
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 1.7e-81 306.6 230 67.8
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 9.5e-77 290.8 227 69.6
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 1.4e-75 287.0 245 64.1
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.1e-72 277.3 235 60.4
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.3e-65 253.8 140 86.4
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 3.5e-63 245.7 139 87.8
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.0e-63 245.0 165 77.6
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.0e-62 244.2 218 53.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.8e-60 236.1 243 53.5
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 4.0e-59 232.3 148 77.0
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 4.4e-58 228.8 227 51.1
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.3e-30 137.5 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 6.4e-25 118.6 221 34.4
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.4e-19 100.1 122 54.1
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 6.3e-12 75.5 57 64.9
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 7.2e-08 62.0 44 68.2


User provided reference genes

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