Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 2.3e-57 225.3 114 100.0
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 2.5e-35 152.1 114 70.2
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 2.1e-34 149.1 113 68.1
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.5e-32 142.9 114 62.3
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 4.9e-31 137.9 117 63.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 7.8e-29 130.6 113 59.3
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 6.6e-28 127.5 115 63.5
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 6.6e-28 127.5 115 63.5
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 1.5e-27 126.3 107 64.5
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 6.2e-26 120.9 116 53.4
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-25 120.2 116 54.3
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 3.1e-25 118.6 117 55.6
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 3.1e-25 118.6 94 59.6
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 5.2e-25 117.9 106 56.6
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 5.2e-25 117.9 119 55.5
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-24 116.7 106 55.7
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-24 116.7 94 59.6
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 2.2e-23 112.5 94 58.5
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 2.9e-23 112.1 97 56.7
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 4.9e-23 111.3 90 62.2
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 4.9e-23 111.3 90 62.2
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 6.4e-23 110.9 94 61.7
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 8.4e-23 110.5 95 57.9
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.4e-22 109.8 90 58.9
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 3.2e-22 108.6 116 49.1
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 3.2e-22 108.6 101 56.4
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 4.2e-22 108.2 102 58.8
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 5.4e-22 107.8 91 60.4
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 7.1e-22 107.5 92 56.5
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 9.3e-22 107.1 86 64.0
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 9.3e-22 107.1 88 58.0
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 1.2e-21 106.7 87 65.5
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 1.6e-21 106.3 90 61.1
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 2.1e-21 105.9 93 60.2
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 2.7e-21 105.5 86 60.5
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 3.5e-21 105.1 86 59.3
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 4.6e-21 104.8 101 54.5
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 4.6e-21 104.8 90 58.9
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 6.0e-21 104.4 94 52.1
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 6.0e-21 104.4 101 54.5
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 7.8e-21 104.0 90 58.9
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 7.8e-21 104.0 90 58.9
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 7.8e-21 104.0 89 60.7
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 7.8e-21 104.0 84 60.7
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.0e-20 103.6 90 60.0
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.0e-20 103.6 89 60.7
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 1.3e-20 103.2 92 57.6
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.7e-20 102.8 106 50.9
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 1.7e-20 102.8 96 60.4
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 3.0e-20 102.1 83 63.9
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 3.9e-20 101.7 86 59.3
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 5.1e-20 101.3 106 55.7
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 5.1e-20 101.3 88 55.7
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 6.6e-20 100.9 103 59.2
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 6.6e-20 100.9 92 56.5
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 8.7e-20 100.5 84 61.9
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 8.7e-20 100.5 92 57.6
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 8.7e-20 100.5 86 55.8
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.1e-19 100.1 85 61.2
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.5e-19 99.8 103 56.3
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 1.5e-19 99.8 88 61.4
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 2.5e-19 99.0 86 60.5
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 4.3e-19 98.2 101 52.5
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 7.3e-19 97.4 83 59.0
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.3e-18 96.7 85 54.1
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 3.6e-18 95.1 92 56.5
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 3.6e-18 95.1 99 51.5
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 4.8e-18 94.7 89 56.2
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 4.8e-18 94.7 89 56.2
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 6.2e-18 94.4 77 58.4
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 8.1e-18 94.0 96 52.1
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 8.1e-18 94.0 85 52.9
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 1.1e-17 93.6 83 57.8
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.4e-17 93.2 84 53.6
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.4e-17 93.2 89 56.2
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 1.8e-17 92.8 91 53.8
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 3.1e-17 92.0 82 57.3
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 5.3e-17 91.3 83 55.4
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 9.0e-17 90.5 93 52.7
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 9.0e-17 90.5 102 48.0
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 9.0e-17 90.5 57 73.7
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.2e-16 90.1 74 62.2
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 2.6e-16 89.0 94 51.1
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 7.6e-16 87.4 98 50.0
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 9.9e-16 87.0 98 50.0
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.3e-15 86.7 88 52.3
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 6.4e-15 84.3 104 50.0
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 8.4e-15 84.0 140 37.9
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 1.1e-14 83.6 103 39.8
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 3.2e-14 82.0 52 76.9
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 2.3e-12 75.9 60 60.0
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 3.9e-12 75.1 95 46.3
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 9.0e-09 63.9 94 36.2
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 1.2e-08 63.5 75 49.3
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 4.9e-07 58.2 52 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 8.4e-07 57.4 54 55.6


User provided reference genes

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