Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 1.4e-69 266.2 135 100.0
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 4.9e-30 134.8 134 61.2
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 1.1e-29 133.7 129 57.4
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 4.2e-29 131.7 141 55.3
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 6.0e-28 127.9 129 54.3
VMungo0251G0397 Vigna mungo HOM05D008176 ORTHO05D004477 3.6e-25 118.6 133 53.4
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 6.9e-24 114.4 145 52.4
Medtr8g089920 Medicago truncatula HOM05D008176 ORTHO05D004477 2.0e-23 112.8 141 51.8
TPR.G6203 Trifolium pratense HOM05D008176 ORTHO05D004477 2.7e-20 102.4 143 48.3
Ca_16509_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 6.7e-19 97.8 150 44.0
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 1.1e-18 97.1 143 44.8
Lalb_Chr12g0203981 Lupinus albus HOM05D008176 ORTHO05D004477 2.5e-18 95.9 139 49.6
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 5.6e-18 94.7 150 42.7
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 5.6e-18 94.7 148 42.6
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.3e-17 93.6 125 45.6
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.6e-15 85.9 125 45.6
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 8.4e-14 80.9 139 39.6
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.1e-13 80.5 141 40.4
Lalb_Chr11g0075471 Lupinus albus HOM05D008176 ORTHO05D004477 1.1e-13 80.5 143 38.5
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 6.0e-12 74.7 133 42.1
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 7.9e-12 74.3 130 43.1
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 7.9e-12 74.3 129 38.0
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 1.3e-11 73.6 147 40.8
Psat5g090880 Pisum sativum HOM05D008176 ORTHO05D004477 1.3e-11 73.6 143 39.2
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 1.8e-11 73.2 143 41.3
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 2.3e-11 72.8 133 38.3
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 3.9e-11 72.0 136 43.4
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 5.1e-11 71.6 135 38.5
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 8.7e-11 70.9 136 42.6
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.1e-10 70.5 136 42.6
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.9e-10 69.7 137 42.3
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 3.3e-10 68.9 144 41.7
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 7.4e-10 67.8 142 39.4
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.6e-09 66.6 129 40.3
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 2.1e-09 66.2 134 38.8
MSTRG.23362 Avicennia marina HOM05D008176 ORTHO05D004477 3.7e-09 65.5 137 38.0
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 3.7e-09 65.5 141 38.3
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 4.8e-09 65.1 137 36.5
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 6.2e-09 64.7 146 39.0
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 8.2e-09 64.3 135 40.7
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 1.8e-08 63.2 141 36.2
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 3.1e-08 62.4 128 35.2
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 4.0e-08 62.0 119 40.3
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 5.3e-08 61.6 127 37.8
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 9.0e-08 60.8 129 37.2
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 9.0e-08 60.8 147 36.7
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 2.6e-07 59.3 133 36.8
SalBow3G2508 Salvia bowleyana HOM05D029310 ORTHO05D004477 4.5e-07 58.5 141 38.3
SalBow3G3284 Salvia bowleyana HOM05D029310 ORTHO05D004477 4.5e-07 58.5 141 38.3
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.3e-06 57.0 137 34.3
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 1.3e-06 57.0 141 32.6
Potri.007G097000 Populus trichocarpa HOM05D008176 ORTHO05D004477 1.3e-06 57.0 134 36.6
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 1.7e-06 56.6 145 35.2
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 1.7e-06 56.6 135 34.8
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.2e-06 56.2 137 34.3
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.2e-06 56.2 124 37.1
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 2.9e-06 55.8 171 33.3
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.9e-06 55.8 122 35.2
Manes.13G096700 Manihot esculenta HOM05D008176 ORTHO05D004477 3.8e-06 55.5 133 35.3
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 6.5e-06 54.7 122 34.4
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 6.5e-06 54.7 122 34.4
Sc03g0000170 Simmondsia chinensis HOM05D031888 ORTHO05D004477 6.5e-06 54.7 178 30.3
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 6.5e-06 54.7 125 31.2


User provided reference genes

Program Settings