Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 9.5e-220 766.5 385 100.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 9.6e-172 607.1 376 81.1
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 9.0e-170 600.5 382 79.1
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 1.0e-168 597.0 383 78.1
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.7e-168 596.3 383 78.3
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 9.3e-167 590.5 377 79.3
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 7.9e-166 587.4 377 79.0
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.9e-165 585.1 379 78.1
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.7e-160 569.7 383 73.4
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 5.0e-160 568.2 377 75.9
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 6.3e-155 551.2 386 74.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.8e-141 506.5 371 67.9
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-138 497.3 357 70.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 5.9e-137 491.5 372 67.7
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.2e-135 485.3 385 65.7
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 5.5e-135 485.0 365 66.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.1e-134 483.0 374 66.3
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.7e-134 482.6 373 64.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.6e-134 482.3 373 65.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 4.7e-134 481.9 372 66.9
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 6.1e-134 481.5 370 66.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 6.7e-133 478.0 381 64.3
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.6e-132 476.1 363 65.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 9.7e-132 474.2 382 63.4
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 3.7e-131 472.2 380 63.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 4.8e-131 471.9 381 62.5
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 6.3e-131 471.5 361 65.4
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 8.2e-131 471.1 368 65.8
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.4e-130 469.5 363 64.7
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.6e-129 466.8 383 63.2
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.6e-129 466.8 372 65.3
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 4.5e-129 465.3 372 65.1
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.2e-128 463.0 375 63.7
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 8.5e-128 461.1 378 63.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.5e-127 460.3 401 59.9
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.5e-127 460.3 378 62.2
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 9.4e-127 457.6 380 64.2
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 2.1e-126 456.4 368 63.0
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.1e-126 456.4 374 62.0
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 4.0e-125 452.2 376 62.2
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 5.7e-124 448.4 390 59.7
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 9.8e-124 447.6 368 63.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.1e-122 444.1 337 64.7
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 9.1e-122 441.0 365 62.5
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 9.1e-122 441.0 438 54.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 5.9e-121 438.3 365 62.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.9e-121 438.3 369 61.2
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 7.7e-121 438.0 288 72.9
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.0e-120 437.6 368 62.5
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.3e-120 436.4 374 60.2
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.0e-120 435.3 380 59.2
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.1e-119 434.1 372 60.8
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.0e-117 427.6 383 58.7
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.8e-117 426.8 266 78.6
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 3.0e-117 426.0 355 59.7
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 6.8e-117 424.9 347 60.5
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.6e-116 422.9 368 58.7
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 3.4e-116 422.5 373 59.2
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.3e-115 420.6 369 58.8
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.3e-115 420.6 379 58.6
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 4.9e-115 418.7 372 59.1
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.4e-114 417.2 377 57.0
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.4e-114 417.2 384 57.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.4e-114 417.2 346 61.0
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.8e-114 416.8 366 58.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.8e-114 416.8 337 63.2
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.4e-114 416.4 379 58.8
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 4.1e-114 415.6 350 60.9
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 5.4e-114 415.2 350 60.9
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 7.0e-114 414.8 285 69.8
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 7.0e-114 414.8 368 57.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 9.2e-114 414.5 371 58.5
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.2e-113 414.1 361 59.6
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.6e-113 413.7 350 60.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 2.7e-113 412.9 378 57.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.5e-113 412.5 373 57.4
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.0e-112 411.0 368 56.8
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 2.3e-112 409.8 374 57.0
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 2.9e-112 409.5 366 58.7
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.8e-112 409.1 384 55.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.3e-111 406.0 341 62.2
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.8e-109 400.2 392 54.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 6.4e-107 391.7 357 56.6
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.1e-106 391.0 363 58.1
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.0e-105 386.7 369 55.0
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.9e-104 382.5 273 65.9
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.9e-103 380.2 373 56.3
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.6e-102 377.1 296 61.8
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-101 372.9 273 68.5
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 3.7e-99 365.9 297 60.9
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 5.0e-96 355.5 278 61.5
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.5e-95 354.0 399 47.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 7.3e-95 351.7 340 54.4
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.6e-94 349.4 337 54.6
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 4.4e-92 342.4 232 70.7
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.2e-91 340.1 233 70.4
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.7e-89 333.2 309 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 7.8e-89 331.6 274 58.8
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.6e-88 328.6 214 72.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.5e-87 326.6 380 47.1
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 2.6e-84 316.6 312 50.3
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.4e-83 312.0 180 78.3
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.8e-77 293.9 333 48.3
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.8e-77 293.9 300 54.0
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 5.8e-76 288.9 181 71.8
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.0e-72 278.1 299 49.5
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.3e-64 251.1 193 71.5
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.3e-55 219.9 225 49.3
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.2e-46 190.7 163 55.8
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 6.3e-46 189.1 308 37.7
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.9e-42 177.6 274 42.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.3e-40 170.6 141 61.0
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.4e-36 156.8 157 51.0
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.7e-35 154.5 198 43.4
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 2.1e-25 120.9 99 62.6
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.6e-17 94.7 109 53.2
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.5e-10 71.6 55 58.2
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.5e-10 70.9 49 61.2


User provided reference genes

Program Settings