Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 8.5e-260 899.8 458 100.0
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 4.4e-163 578.6 462 68.8
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 2.4e-161 572.8 428 71.5
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.1e-149 533.1 431 66.8
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.6e-136 490.3 431 63.6
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 7.3e-134 481.5 385 65.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 2.1e-133 479.9 355 69.9
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.2e-128 464.2 442 56.6
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 4.6e-128 462.2 430 59.3
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 3.0e-127 459.5 433 58.7
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 8.6e-127 458.0 433 58.4
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 8.6e-127 458.0 437 58.1
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 1.5e-126 457.2 378 62.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.9e-126 456.8 448 57.8
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 5.6e-126 455.3 448 56.7
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 6.2e-125 451.8 397 60.7
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 6.2e-125 451.8 397 60.7
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.4e-124 450.7 440 57.7
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 2.3e-124 449.9 456 56.4
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 4.0e-124 449.1 394 60.9
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.8e-124 448.4 386 60.9
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.0e-123 446.8 427 59.0
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 4.4e-123 445.7 391 60.6
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.8e-123 445.3 401 61.3
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 7.5e-123 444.9 441 56.0
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 7.5e-123 444.9 401 60.8
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 7.5e-123 444.9 387 60.5
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 3.7e-122 442.6 390 60.8
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.9e-121 440.3 381 62.2
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.9e-121 440.3 419 57.3
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.9e-121 440.3 401 61.1
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.0e-121 438.3 386 58.8
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 1.2e-120 437.6 399 60.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.0e-120 436.8 397 59.4
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 2.7e-120 436.4 441 55.3
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.7e-120 436.4 450 54.7
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.7e-120 436.4 437 54.7
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 4.6e-120 435.6 447 55.0
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.0e-119 434.5 386 58.5
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.3e-119 434.1 414 56.8
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 1.3e-119 434.1 378 59.0
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 3.9e-119 432.6 411 55.7
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 3.9e-119 432.6 411 55.7
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 8.6e-119 431.4 414 56.3
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 8.6e-119 431.4 413 56.9
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 1.1e-118 431.0 311 71.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 3.3e-118 429.5 386 58.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 4.3e-118 429.1 440 55.2
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 6.2e-117 425.2 404 56.7
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 6.8e-116 421.8 406 56.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.2e-115 421.0 414 53.9
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 5.8e-115 418.7 386 59.1
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 5.8e-115 418.7 390 55.9
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.8e-115 418.7 438 53.4
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.9e-110 403.7 407 53.1
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.2e-109 401.0 446 50.7
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 2.1e-109 400.2 387 53.5
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 6.2e-109 398.7 353 58.6
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 3.1e-108 396.4 415 52.5
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 5.2e-108 395.6 427 51.1
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 2.0e-107 393.7 436 50.7
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.3e-106 391.0 394 53.0
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.9e-106 389.0 387 53.2
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.9e-105 387.1 438 49.3
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.9e-105 387.1 438 49.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 5.4e-105 385.6 429 49.7
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.6e-104 384.0 426 49.3
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 2.1e-104 383.6 429 49.9
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 2.1e-104 383.6 426 49.1
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 4.6e-104 382.5 388 52.3
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 7.8e-104 381.7 426 49.5
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.5e-102 376.7 424 49.5
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 4.3e-102 375.9 426 48.8
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 4.3e-102 375.9 392 51.5
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.2e-101 374.4 398 52.8
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.8e-101 373.2 388 49.7
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 3.9e-95 352.8 338 56.8
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 8.1e-93 345.1 339 55.8
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.3e-87 327.8 402 45.5
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.1e-86 324.7 402 45.3
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 9.0e-84 315.1 362 48.9
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.6e-78 295.0 399 41.6
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 2.6e-75 287.0 284 55.3
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.0e-74 285.0 375 43.5
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.1e-73 281.6 279 56.3
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 7.9e-72 275.4 388 39.7
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 3.3e-70 270.0 247 58.7
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.7e-70 268.5 353 41.9
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.4e-68 264.6 411 39.7
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 5.0e-66 256.1 305 45.9
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 3.6e-64 250.0 312 45.2
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 6.3e-53 212.6 374 35.6
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.1e-52 209.9 229 52.4
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 4.5e-51 206.5 123 82.1
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.9e-49 201.1 132 75.0
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 4.7e-48 196.4 396 34.3
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 7.4e-46 189.1 247 41.3
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 3.1e-44 183.7 622 26.2
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-34 150.6 134 58.2
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.4e-31 141.7 136 55.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 2.0e-22 111.3 362 28.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 4.1e-20 103.6 98 58.2
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.9e-17 94.7 76 59.2
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.5e-17 94.4 83 57.8
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 9.5e-17 92.4 74 63.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.8e-15 88.2 81 54.3
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 4.0e-15 87.0 81 56.8
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.2e-13 81.3 78 55.1
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.9e-12 78.2 90 47.8
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.3e-10 71.2 64 59.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 2.3e-10 71.2 37 89.2
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.3e-07 61.2 54 55.6


User provided reference genes

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