Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 0.0e+00 1217.2 610 100.0
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.0e-268 929.9 629 75.7
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.2e-264 916.4 612 76.1
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 4.5e-264 914.4 611 76.8
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 3.8e-263 911.4 617 74.9
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 3.1e-249 865.1 610 73.4
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.5e-248 862.8 616 73.4
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.6e-248 862.1 616 73.5
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 5.0e-247 857.8 611 72.7
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 3.9e-236 821.6 615 69.8
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 6.5e-231 804.3 615 68.6
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.2e-205 720.3 618 61.0
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 5.7e-203 711.4 628 62.1
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 2.8e-202 709.1 615 60.0
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.9e-198 696.4 654 57.2
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 4.7e-197 691.8 615 59.7
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 1.8e-196 689.9 618 59.7
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.0e-195 686.4 616 58.6
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.4e-195 685.6 616 59.3
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 6.0e-192 674.9 622 58.2
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 6.0e-192 674.9 622 58.8
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 7.8e-192 674.5 627 58.5
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.7e-191 673.3 620 58.1
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.7e-191 673.3 620 59.4
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 8.6e-191 671.0 626 57.8
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.9e-190 669.8 620 58.4
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.9e-190 669.8 622 58.7
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 2.5e-190 669.5 619 59.5
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 8.0e-189 664.5 619 58.6
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 8.0e-189 664.5 622 58.0
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.1e-188 664.1 617 58.8
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 6.8e-188 661.4 636 57.5
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 6.8e-188 661.4 625 57.0
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 2.0e-187 659.8 625 57.6
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 9.8e-187 657.5 618 57.6
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.3e-186 657.1 618 57.4
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.7e-184 649.4 638 57.1
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 1.7e-183 646.7 643 55.7
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 2.3e-183 646.4 593 56.8
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.1e-182 644.0 594 57.4
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 4.7e-181 638.6 619 55.7
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.5e-179 633.6 654 55.0
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 1.4e-177 627.1 612 54.9
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.2e-176 624.0 614 53.9
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 3.9e-175 619.0 621 55.4
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 3.3e-174 615.9 623 55.2
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 3.1e-172 609.4 533 58.7
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 9.3e-169 597.8 624 54.0
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 1.2e-168 597.4 618 53.2
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 1.2e-168 597.4 614 51.8
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 5.1e-167 592.0 515 61.4
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 2.0e-163 580.1 656 52.6
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 3.4e-163 579.3 610 53.6
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 5.8e-163 578.6 569 52.9
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 9.9e-163 577.8 605 53.1
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.3e-162 577.4 615 53.0
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.3e-162 577.4 617 52.8
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 8.4e-162 574.7 616 52.8
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.1e-161 574.3 578 54.5
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.2e-161 572.8 615 52.4
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 4.2e-161 572.4 684 47.5
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 6.0e-160 568.5 613 52.9
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 6.0e-160 568.5 623 51.8
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 1.3e-159 567.4 618 51.1
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 1.7e-159 567.0 617 52.0
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.1e-158 564.3 618 51.3
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.1e-158 564.3 625 51.5
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.9e-158 563.5 520 56.7
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 7.3e-158 561.6 618 50.2
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 7.3e-158 561.6 631 49.3
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.1e-157 560.1 561 51.9
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 5.8e-155 552.0 611 50.6
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 1.7e-154 550.4 645 49.5
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.9e-154 549.7 572 53.0
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 8.4e-154 548.1 542 54.2
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.4e-153 547.4 545 53.9
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 4.2e-153 545.8 616 50.2
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 5.6e-150 535.4 575 52.0
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 2.8e-149 533.1 654 46.8
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 6.2e-149 531.9 619 50.1
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 6.9e-148 528.5 521 54.5
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 1.1e-145 521.2 640 48.3
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.4e-145 520.8 640 48.6
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 3.2e-145 519.6 547 51.4
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 1.2e-144 517.7 579 50.8
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 2.7e-144 516.5 575 50.8
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.3e-143 514.2 526 54.4
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.6e-141 507.3 612 48.9
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 4.8e-141 505.8 495 54.9
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 6.2e-141 505.4 630 45.4
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 8.4e-138 495.0 599 46.9
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.1e-137 494.6 449 56.6
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 6.3e-133 478.8 571 49.0
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.9e-130 469.9 642 44.4
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.9e-129 467.2 605 45.0
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 2.3e-119 433.7 493 47.9
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.8e-117 426.0 400 52.2
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.6e-94 350.5 456 45.8
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.3e-90 337.4 491 39.5
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.4e-86 323.6 497 39.8
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 7.3e-81 305.8 650 36.0
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 1.0e-79 302.0 525 36.0
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 5.8e-62 243.0 300 51.3
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 8.6e-58 229.2 205 58.0
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 8.1e-56 222.6 319 40.4
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 2.7e-51 207.6 193 57.5
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 2.5e-41 174.5 569 26.9
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 1.0e-29 136.0 440 28.0
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.6e-27 128.6 578 23.2
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 2.3e-26 124.8 370 30.3
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 3.1e-23 114.4 123 48.8
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.3e-17 94.0 122 48.4
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.3e-17 94.0 122 48.4
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.3e-17 94.0 121 47.1
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.3e-17 94.0 121 47.1
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 1.3e-16 92.4 68 64.7
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.6e-11 75.5 116 36.2
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 7.4e-09 66.6 201 30.3
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 1.8e-07 62.0 68 55.9


User provided reference genes

Program Settings