Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 0.0e+00 2599.3 1292 100.0
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 0.0e+00 2295.8 1292 87.5
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 0.0e+00 2282.7 1293 86.9
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 0.0e+00 2281.9 1293 87.2
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 0.0e+00 2263.0 1293 85.9
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 0.0e+00 2253.8 1296 86.5
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 0.0e+00 2253.0 1294 86.3
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 0.0e+00 2252.2 1294 86.2
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 0.0e+00 2246.9 1293 85.4
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 0.0e+00 2240.7 1292 86.3
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 0.0e+00 2233.0 1292 85.2
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 0.0e+00 2201.0 1353 81.3
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 0.0e+00 1926.4 1302 73.5
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 0.0e+00 1897.9 1301 72.6
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 0.0e+00 1893.6 1301 72.6
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 0.0e+00 1891.3 1301 72.5
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 0.0e+00 1884.4 1301 72.1
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 0.0e+00 1884.4 1301 71.9
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 0.0e+00 1884.0 1341 71.9
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 0.0e+00 1875.5 1307 72.1
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 0.0e+00 1870.5 1329 70.6
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 0.0e+00 1865.1 1308 71.6
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 0.0e+00 1865.1 1303 71.5
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 0.0e+00 1864.7 1301 71.8
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 0.0e+00 1863.6 1333 71.3
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 0.0e+00 1857.4 1302 71.4
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 0.0e+00 1854.0 1302 70.8
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 0.0e+00 1841.2 1306 71.1
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 0.0e+00 1837.8 1304 69.9
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 0.0e+00 1833.2 1313 70.1
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 0.0e+00 1831.2 1290 70.1
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 0.0e+00 1827.0 1300 70.5
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 0.0e+00 1824.3 1306 71.0
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 0.0e+00 1819.3 1302 70.3
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 0.0e+00 1818.9 1300 70.2
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 0.0e+00 1818.1 1284 71.0
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 0.0e+00 1811.2 1300 70.2
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 0.0e+00 1805.4 1315 68.3
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 0.0e+00 1805.0 1301 68.9
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 0.0e+00 1800.4 1360 66.6
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 0.0e+00 1798.5 1316 67.8
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 0.0e+00 1790.8 1304 69.0
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 0.0e+00 1774.6 1300 67.2
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 0.0e+00 1769.2 1305 67.6
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 0.0e+00 1763.4 1298 67.1
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 0.0e+00 1758.0 1302 66.7
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 0.0e+00 1755.7 1305 67.1
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 0.0e+00 1755.0 1312 68.0
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 0.0e+00 1749.2 1301 68.9
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 0.0e+00 1747.6 1300 67.4
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 0.0e+00 1743.0 1296 67.2
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 0.0e+00 1740.3 1299 66.5
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 0.0e+00 1735.3 1334 64.5
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 0.0e+00 1731.8 1338 64.2
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 0.0e+00 1730.7 1306 66.2
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 0.0e+00 1730.3 1304 66.9
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 0.0e+00 1730.3 1299 67.2
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 0.0e+00 1723.0 1301 67.5
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 0.0e+00 1709.5 1395 62.6
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 0.0e+00 1705.6 1323 66.7
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 0.0e+00 1697.9 1301 65.5
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 0.0e+00 1696.4 1301 65.3
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 0.0e+00 1696.4 1301 65.6
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 0.0e+00 1696.0 1301 65.7
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 0.0e+00 1692.6 1298 65.5
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 0.0e+00 1687.9 1303 64.9
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 0.0e+00 1687.5 1301 65.2
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 0.0e+00 1686.0 1301 64.8
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 0.0e+00 1686.0 1301 64.8
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 0.0e+00 1684.8 1301 65.3
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 0.0e+00 1680.2 1301 64.6
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 0.0e+00 1676.8 1299 64.7
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 0.0e+00 1675.6 1299 64.6
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 0.0e+00 1666.4 1298 64.3
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 0.0e+00 1656.3 1342 63.9
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 0.0e+00 1652.5 1210 70.2
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 0.0e+00 1651.7 1302 64.0
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 0.0e+00 1650.2 1304 64.3
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 0.0e+00 1649.4 1302 64.0
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 0.0e+00 1643.2 1302 63.7
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 0.0e+00 1642.5 1302 63.7
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 0.0e+00 1634.4 1293 63.7
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 0.0e+00 1632.1 1318 63.0
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 0.0e+00 1625.1 1287 65.0
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 0.0e+00 1621.7 1299 65.0
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 0.0e+00 1614.7 1204 66.6
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 0.0e+00 1586.2 1316 62.5
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 0.0e+00 1579.3 1218 65.8
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 0.0e+00 1565.1 1306 61.6
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 0.0e+00 1564.7 1309 61.3
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 0.0e+00 1554.3 1207 65.3
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 0.0e+00 1494.2 1323 58.1
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 0.0e+00 1427.2 1299 58.0
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 0.0e+00 1414.4 1292 57.3
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 0.0e+00 1412.1 1297 57.3
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 0.0e+00 1400.6 1362 53.3
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 0.0e+00 1375.1 1296 54.9
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 0.0e+00 1331.2 1319 53.4
THA.LOC104802333 Tarenaya hassleriana HOM05D004461 ORTHO05D005543 0.0e+00 1317.0 980 67.1
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 0.0e+00 1295.0 1297 54.0
Sed0020878 Sechium edule HOM05D004461 ORTHO05D005543 0.0e+00 1294.3 975 68.0
Ah.13g073400 Amaranthus hybridus HOM05D004461 ORTHO05D005543 0.0e+00 1255.0 1008 63.9
Sed0010516 Sechium edule HOM05D004461 ORTHO05D005543 0.0e+00 1151.0 1088 57.0
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 0.0e+00 1119.0 984 59.2
SHI26120 Sapria himalayana HOM05D004461 ORTHO05D005543 0.0e+00 1087.8 909 61.9
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 2.3e-286 989.6 1100 50.0
Nitab4.5_0000474g0010 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.0e-273 947.6 632 72.9
Nitab4.5_0002660g0030 Nicotiana tabacum HOM05D004461 ORTHO05D005543 6.1e-271 938.3 630 72.9
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 7.7e-266 921.4 775 61.8
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 3.3e-264 916.0 1305 41.1
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 2.4e-259 899.8 1328 41.6
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 4.1e-259 899.0 864 56.8
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 2.7e-258 896.3 1329 40.0
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 4.5e-258 895.6 864 56.6
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 2.3e-254 883.2 1299 42.0
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 4.6e-250 869.0 1360 38.1
Ciclev10018900m.g Citrus clementina HOM05D004461 ORTHO05D005543 1.1e-227 794.7 438 85.6
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.1e-224 784.6 656 61.0
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 4.7e-223 779.2 902 47.8
vmacro00682 Vaccinium macrocarpon HOM05D004461 ORTHO05D005543 6.7e-209 732.3 407 85.3
CSS0024115 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 3.4e-205 719.9 407 83.3
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 6.1e-186 656.0 660 54.2
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 5.3e-174 616.3 656 51.5
CSS0041950 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.1e-158 565.5 315 85.4
Gohir.D02G008466 Gossypium hirsutum HOM05D004461 ORTHO05D005543 6.1e-146 523.1 312 79.5
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 5.9e-141 506.5 1838 27.0
BcaC07g40445 Brassica carinata HOM05D004461 ORTHO05D005543 6.0e-133 479.9 434 60.1
CiPaw.01G169500 Carya illinoinensis HOM05D004461 ORTHO05D005543 7.3e-131 473.0 325 71.1
Ciclev10021462m.g Citrus clementina HOM05D004461 ORTHO05D005543 1.9e-126 458.4 255 83.5
Eucgr.G01607 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.5e-123 448.7 307 68.1
CDE09G0162 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 7.3e-123 446.4 328 65.2
SEGI_09597 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 2.2e-111 408.3 312 62.2
Gohir.D02G008175 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.9e-92 344.4 334 56.9
vmacro00709 Vaccinium macrocarpon HOM05D004461 ORTHO05D005543 9.6e-91 339.7 438 44.5
TAR624G0657 Trochodendron aralioides HOM05D004461 ORTHO05D005543 1.3e-90 339.3 364 52.2
SEGI_23669 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 7.9e-85 320.1 319 51.1
FAN23G0644 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.1e-81 308.1 164 86.0
MBI11_g07551_MAGBIO Magnolia biondii HOM05D004461 ORTHO05D005543 1.4e-70 272.7 326 49.4
SEGI_16668 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 6.1e-69 267.3 328 46.6
TAR624G0217 Trochodendron aralioides HOM05D004461 ORTHO05D005543 2.8e-66 258.5 240 58.3
SEGI_12893 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 1.8e-60 239.2 362 40.9
PRCOL_00002927 Prasinoderma coloniale HOM05D004461 ORTHO05D005543 8.8e-52 210.3 554 29.8
MCO04G405 Micromonas commoda HOM05D004461 ORTHO05D005543 5.9e-48 197.6 383 32.9
TAR624G0560 Trochodendron aralioides HOM05D004461 ORTHO05D005543 6.1e-37 161.0 136 64.7
Solyc08g044410.1 Solanum lycopersicum HOM05D004461 ORTHO05D005543 8.0e-37 160.6 96 74.0
Atru.chr4.1505 Acer truncatum HOM05D004461 ORTHO05D005543 9.8e-35 153.7 90 75.6
Lsat_1_v5_gn_3_101581 Lactuca sativa HOM05D004461 ORTHO05D029960 8.3e-34 150.6 127 57.5
Lsat_1_v5_gn_2_119641 Lactuca sativa HOM05D004461 ORTHO05D029960 9.1e-33 147.1 128 56.2
Nn1g03496 Nelumbo nucifera HOM05D004461 ORTHO05D005543 4.5e-32 144.8 90 76.7
Lsat_1_v5_gn_3_104101 Lactuca sativa HOM05D004461 ORTHO05D005543 2.8e-21 109.0 225 36.0
BcaB02g08211 Brassica carinata HOM05D021787 ORTHO05D005543 7.0e-17 94.4 102 45.1
SHI26123 Sapria himalayana HOM05D004461 ORTHO05D029960 1.6e-13 83.2 74 58.1
Cre01.g009300 Chlamydomonas reinhardtii HOM05D004461 ORTHO05D005543 5.2e-12 78.2 173 31.8
Ciclev10020582m.g Citrus clementina HOM05D002050 ORTHO05D001949 5.1e-07 61.6 49 63.3


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