Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 1.3e-197 693.0 373 100.0
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 2.2e-88 330.1 384 55.7
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 2.2e-35 154.1 366 35.2
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 3.8e-32 143.3 412 33.5
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 3.8e-32 143.3 412 33.5
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 8.5e-32 142.1 370 33.0
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 1.8e-29 134.4 395 32.9
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 2.3e-29 134.0 368 33.2
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 3.9e-29 133.3 370 33.5
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 2.4e-26 124.0 428 30.4
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 5.3e-26 122.9 466 29.0
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 5.9e-25 119.4 415 31.6
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 1.7e-24 117.9 392 27.3
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 6.5e-24 115.9 396 30.6
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.9e-23 114.4 492 26.6
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 3.2e-23 113.6 387 31.8
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 4.2e-23 113.2 273 35.5
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 1.4e-21 108.2 454 28.0
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 1.8e-21 107.8 298 29.9
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 2.3e-21 107.5 443 30.9
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 4.0e-21 106.7 392 29.1
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 6.7e-21 105.9 384 28.6
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.2e-20 105.1 410 31.2
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 2.0e-20 104.4 397 31.5
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 5.7e-20 102.8 389 29.0
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 5.7e-20 102.8 266 32.3
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 7.5e-20 102.4 399 28.1
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.7e-19 101.3 239 33.5
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.8e-19 100.5 366 28.1
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 2.8e-19 100.5 161 41.0
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 3.7e-19 100.1 348 28.7
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 4.8e-19 99.8 329 29.5
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 6.3e-19 99.4 398 29.1
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 6.3e-19 99.4 400 28.8
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 8.2e-19 99.0 451 27.7
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.4e-18 97.4 400 29.5
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 9.1e-18 95.5 383 28.7
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.0e-17 94.4 421 29.2
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 2.7e-17 94.0 389 26.7
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 3.5e-17 93.6 412 26.2
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 3.5e-17 93.6 359 29.2
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 3.5e-17 93.6 279 29.4
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 4.5e-17 93.2 371 28.8
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 4.5e-17 93.2 313 31.9
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 5.9e-17 92.8 342 29.5
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 2.2e-16 90.9 321 30.8
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 2.2e-16 90.9 355 27.6
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 2.2e-16 90.9 437 27.0
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 2.9e-16 90.5 282 33.0
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 2.9e-16 90.5 282 29.1
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 5.0e-16 89.7 431 25.8
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 6.5e-16 89.4 456 28.5
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 8.5e-16 89.0 421 28.7
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 8.5e-16 89.0 355 27.3
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.1e-15 88.6 397 27.7
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 1.5e-15 88.2 322 28.9
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.5e-15 88.2 354 30.2
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.9e-15 87.8 330 29.1
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.5e-15 87.4 361 29.1
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 3.2e-15 87.0 379 28.8
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 4.2e-15 86.7 343 28.3
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 5.5e-15 86.3 441 26.5
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 7.2e-15 85.9 326 28.5
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.2e-14 85.1 197 35.5
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.2e-14 85.1 225 31.6
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 1.6e-14 84.7 310 29.4
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.1e-14 84.3 216 31.9
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.1e-14 84.3 189 35.4
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.7e-14 84.0 435 26.4
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.7e-14 84.0 435 27.1
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 3.6e-14 83.6 341 29.6
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 3.6e-14 83.6 346 28.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.0e-13 82.0 360 28.6
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.4e-13 81.6 360 28.6
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.3e-13 80.9 239 31.0
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.3e-13 80.9 398 25.1
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 3.0e-13 80.5 181 34.8
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 3.0e-13 80.5 371 25.1
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 4.0e-13 80.1 180 32.2
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 8.8e-13 79.0 197 29.4
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 8.8e-13 79.0 174 33.3
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.2e-12 78.6 195 32.3
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 1.2e-12 78.6 234 31.2
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.5e-12 78.2 178 30.3
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.0e-12 77.8 179 33.0
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 2.6e-12 77.4 167 32.3
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.6e-12 77.4 272 30.9
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 3.4e-12 77.0 298 30.5
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 9.8e-12 75.5 337 30.0
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 9.8e-12 75.5 181 35.4
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.3e-11 75.1 454 26.0
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.3e-11 75.1 177 33.9
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.2e-11 74.3 378 26.7
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 2.2e-11 74.3 209 29.7
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 2.2e-11 74.3 340 27.9
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 2.8e-11 73.9 263 30.8
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.8e-11 73.9 345 26.4
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 4.8e-11 73.2 336 26.2
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 8.3e-11 72.4 167 34.7
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.1e-10 72.0 304 28.6
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 3.1e-10 70.5 182 33.0
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 5.4e-10 69.7 135 33.3
Glyma.17G193101 Glycine max HOM05D003426 ORTHO05D003816 7.0e-10 69.3 175 34.3
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.2e-09 68.6 394 25.9
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.0e-09 67.8 310 25.2
Actinidia14135 Actinidia chinensis HOM05D022929 ORTHO05D003816 2.7e-09 67.4 179 29.6
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 4.5e-09 66.6 375 26.1
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 7.7e-09 65.9 330 27.3
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 7.7e-09 65.9 257 25.7
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.0e-08 65.5 137 33.6
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 1.3e-08 65.1 182 27.5
Thhalv10000536m.g Eutrema salsugineum HOM05D012895 ORTHO05D014428 1.3e-08 65.1 332 27.1
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 2.3e-08 64.3 214 26.6
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 2.3e-08 64.3 188 30.3
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 2.9e-08 63.9 177 32.2
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 3.8e-08 63.5 203 29.6
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.0e-08 63.2 285 30.5
C04p53570 Brassica napus HOM05D012895 ORTHO05D014428 5.0e-08 63.2 364 26.6
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 5.0e-08 63.2 193 26.9
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.0e-08 63.2 257 31.5
SalBow6G1286 Salvia bowleyana HOM05D000650 ORTHO05D007302 5.0e-08 63.2 172 27.3
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 6.6e-08 62.8 383 25.3
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 8.6e-08 62.4 363 25.9
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 8.6e-08 62.4 199 27.1
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 8.6e-08 62.4 169 29.6
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.6e-08 62.4 305 26.6
Oeu063550.2 Olea europaea HOM05D000650 ORTHO05D007302 1.1e-07 62.0 169 27.8
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 1.1e-07 62.0 430 26.3
BcaC02g08512 Brassica carinata HOM05D012895 ORTHO05D014428 1.5e-07 61.6 359 25.6
A04p18340 Brassica napus HOM05D012895 ORTHO05D014428 1.5e-07 61.6 358 26.0
BolC4t26912H Brassica oleracea HOM05D012895 ORTHO05D014428 1.5e-07 61.6 359 25.6
BraA04t17445Z Brassica rapa HOM05D012895 ORTHO05D014428 1.5e-07 61.6 358 26.0
Sp4g02940 Schrenkiella parvula HOM05D012895 ORTHO05D014428 1.5e-07 61.6 360 26.1
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 1.9e-07 61.2 139 28.1
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 3.3e-07 60.5 378 24.1
CARHR184730 Cardamine hirsuta HOM05D012895 ORTHO05D014428 4.2e-07 60.1 371 24.5
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 5.5e-07 59.7 155 29.7
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.5e-07 59.7 339 26.0
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 7.2e-07 59.3 360 25.3
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 9.5e-07 58.9 151 29.1
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.2e-06 58.5 370 24.9
Ah.10g025600 Amaranthus hybridus HOM05D016866 ORTHO05D003816 1.2e-06 58.5 63 49.2
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 1.6e-06 58.2 199 27.6
QL02p018764 Quercus lobata HOM05D003426 ORTHO05D003816 1.6e-06 58.2 159 29.6
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 2.1e-06 57.8 141 29.8
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 2.1e-06 57.8 88 40.9
Zm00001eb177760 Zea mays HOM05D049100 ORTHO05D049675 2.1e-06 57.8 340 25.0
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 2.8e-06 57.4 350 24.9
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 2.8e-06 57.4 177 27.7
Glyma.17G072700 Glycine max HOM05D003426 ORTHO05D003816 3.6e-06 57.0 118 44.1
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 3.6e-06 57.0 245 26.5
RhsimUnG0162700 Rhododendron simsii HOM05D022929 ORTHO05D050680 3.6e-06 57.0 214 27.1
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 4.7e-06 56.6 58 51.7
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 6.1e-06 56.2 149 26.2
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 6.1e-06 56.2 171 29.2
Rhsim07G0165800 Rhododendron simsii HOM05D022929 ORTHO05D050680 6.1e-06 56.2 214 27.1
PGSC0003DMG400043134 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.1e-06 56.2 75 48.0


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