Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.2e-168 595.5 287 100.0
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 3.5e-150 535.0 287 87.8
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 7.7e-150 533.9 287 87.8
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 6.5e-149 530.8 287 86.4
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.7e-147 525.4 287 86.1
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 5.9e-142 507.7 287 82.9
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 3.8e-141 505.0 288 83.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 5.0e-141 504.6 286 83.2
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 2.3e-138 495.7 285 82.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 4.4e-137 491.5 285 79.6
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.8e-136 488.8 287 79.4
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 1.8e-135 486.1 287 76.7
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.8e-135 486.1 287 77.0
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.4e-135 485.7 287 78.4
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 3.1e-135 485.3 285 77.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 4.1e-135 485.0 285 77.9
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 9.2e-135 483.8 287 76.3
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.6e-134 483.0 284 77.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 4.5e-134 481.5 284 78.2
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.9e-134 481.1 284 77.5
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 5.9e-134 481.1 287 77.7
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.0e-133 480.3 285 76.8
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.3e-133 479.9 287 76.7
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 2.9e-133 478.8 287 77.7
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.6e-133 477.6 287 76.3
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 8.6e-133 477.2 284 77.1
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.1e-132 476.9 284 76.1
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 4.3e-132 474.9 287 76.0
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.3e-132 474.9 287 77.4
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.3e-132 474.9 287 77.4
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.3e-132 474.2 287 77.0
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 9.5e-132 473.8 287 76.0
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.6e-131 473.0 284 76.1
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.1e-131 472.6 287 75.3
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 6.1e-131 471.1 287 74.2
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 8.0e-131 470.7 287 74.9
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 8.0e-131 470.7 287 75.3
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.0e-130 470.3 284 75.7
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.8e-130 469.5 285 74.0
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 5.2e-130 468.0 272 78.3
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 6.8e-130 467.6 283 75.3
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 6.8e-130 467.6 284 75.0
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.5e-129 466.5 301 72.1
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.5e-129 466.5 285 74.0
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.4e-129 465.3 271 79.3
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.8e-129 464.5 287 73.2
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 7.5e-129 464.2 285 75.4
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 7.5e-129 464.2 285 74.4
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 9.8e-129 463.8 287 73.9
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 9.8e-129 463.8 287 73.9
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 8.3e-128 460.7 284 75.0
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 4.1e-127 458.4 291 71.8
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 5.4e-127 458.0 286 73.4
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 7.0e-127 457.6 283 72.1
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.2e-127 457.2 288 70.8
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.2e-126 456.8 286 73.4
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.2e-126 456.8 286 73.8
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.2e-126 456.8 288 70.8
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.7e-126 455.7 286 73.4
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.7e-126 455.7 287 69.3
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.8e-126 454.1 309 68.3
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.3e-125 453.4 286 73.8
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 3.0e-125 452.2 284 72.9
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 5.0e-125 451.4 285 72.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.9e-124 449.5 283 72.4
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 5.6e-124 448.0 287 72.1
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 2.1e-123 446.0 282 71.3
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 2.1e-123 446.0 287 72.1
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.7e-123 444.9 279 74.6
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 8.0e-123 444.1 282 72.7
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 5.2e-122 441.4 285 71.2
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 6.8e-122 441.0 287 67.2
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.2e-121 440.3 283 73.9
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 3.4e-121 438.7 290 70.3
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 5.8e-121 438.0 286 69.2
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 2.2e-120 436.0 287 67.2
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 3.7e-120 435.3 286 68.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 8.3e-120 434.1 286 68.5
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.4e-119 433.3 269 73.2
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.4e-119 433.3 269 73.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.4e-119 432.6 327 63.3
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 5.4e-119 431.4 269 72.9
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 9.2e-119 430.6 287 66.6
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.6e-118 429.9 285 72.3
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 6.0e-118 427.9 281 69.0
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.1e-115 419.5 269 69.1
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 2.8e-115 419.1 286 67.5
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 6.8e-114 414.5 273 67.8
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 8.9e-114 414.1 287 65.2
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 8.3e-112 407.5 285 64.9
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.1e-111 407.1 268 69.4
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 7.1e-111 404.4 249 75.1
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 6.2e-107 391.3 262 67.9
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 8.1e-107 391.0 282 64.2
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 5.2e-106 388.3 247 70.9
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.2e-105 387.1 281 64.4
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 5.1e-101 371.7 239 72.0
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.2e-96 356.3 213 77.0
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.2e-81 307.4 263 52.9
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 9.6e-76 287.7 175 73.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 7.1e-71 271.6 260 46.9
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.1e-71 271.6 261 49.4
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.7e-68 261.9 253 51.4
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 4.8e-67 258.8 261 46.0
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.7e-54 215.7 157 66.9
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.7e-46 189.9 111 79.3
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.3e-43 181.0 254 37.0
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 3.1e-42 176.4 151 60.3
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 7.0e-42 175.3 105 73.3
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.6e-41 174.1 194 47.4
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.8e-37 160.6 304 38.2
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 5.2e-37 159.1 94 74.5
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.1e-34 149.4 95 72.6
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.2e-30 137.9 88 69.3
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 7.5e-28 128.6 77 74.0
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 4.7e-22 109.4 66 74.2
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.0e-20 104.0 67 70.1
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 7.0e-10 68.9 41 70.7
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 7.3e-07 58.9 48 62.5


User provided reference genes

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