Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 4.2e-44 181.0 94 100.0
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 1.1e-41 172.9 94 91.5
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 5.6e-41 170.6 94 91.5
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 1.3e-40 169.5 94 92.6
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 2.1e-40 168.7 94 91.5
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.1e-39 166.4 94 88.3
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 9.0e-39 163.3 94 85.1
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 7.6e-38 160.2 89 91.0
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 7.6e-38 160.2 94 83.0
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 7.6e-38 160.2 94 85.1
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 83.0
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 83.0
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 83.0
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 8.4e-37 156.8 94 81.9
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 83.0
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 80.9
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 1.4e-36 156.0 93 82.8
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 1.9e-36 155.6 94 83.0
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 4.2e-36 154.5 94 81.9
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 79.8
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 79.8
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 79.8
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 83.0
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 79.8
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 78.7
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 78.7
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 80.9
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 79.8
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 79.8
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 79.8
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 7.9e-35 150.2 88 83.0
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.0e-34 149.8 87 83.9
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.0e-34 149.8 93 76.3
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.3e-34 149.4 89 82.0
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.8e-34 149.1 88 83.0
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.8e-34 149.1 88 83.0
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.8e-34 149.1 93 76.3
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 77.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 77.7
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 5.1e-34 147.5 94 78.7
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 5.1e-34 147.5 94 78.7
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 5.1e-34 147.5 94 77.7
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 75.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 75.5
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 8.7e-34 146.7 94 78.7
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 8.7e-34 146.7 94 78.7
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.1e-33 146.4 92 77.2
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.5e-33 146.0 89 79.8
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.5e-33 146.0 93 74.2
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.9e-33 145.6 92 77.2
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 3.3e-33 144.8 93 73.1
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 3.3e-33 144.8 94 77.7
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 5.6e-33 144.1 89 76.4
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 7.4e-33 143.7 91 79.1
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 7.4e-33 143.7 86 82.6
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 9.6e-33 143.3 89 78.7
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 9.6e-33 143.3 94 75.5
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 9.6e-33 143.3 94 76.6
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.8e-32 141.7 93 74.2
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 3.7e-32 141.4 80 86.2
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 78.5
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 3.7e-32 141.4 86 81.4
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 4.8e-32 141.0 85 81.2
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 4.8e-32 141.0 92 79.3
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 4.8e-32 141.0 87 79.3
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 4.8e-32 141.0 92 78.3
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 4.8e-32 141.0 94 74.5
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 4.8e-32 141.0 86 81.4
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 6.2e-32 140.6 91 75.8
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.1e-31 139.8 88 79.5
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.8e-31 139.0 87 78.2
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 2.4e-31 138.7 90 76.7
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 2.4e-31 138.7 90 76.7
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 3.1e-31 138.3 89 76.4
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 3.1e-31 138.3 91 73.6
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 9.0e-31 136.7 86 79.1
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 7.6e-30 133.7 159 49.7
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 9.9e-30 133.3 85 76.5
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 9.9e-30 133.3 84 78.6
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 9.9e-30 133.3 84 78.6
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 9.9e-30 133.3 84 78.6
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 9.9e-30 133.3 84 78.6
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 9.9e-30 133.3 84 77.4
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 9.9e-30 133.3 96 71.9
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 1.3e-29 132.9 73 93.2
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 1.7e-29 132.5 85 76.5
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 2.9e-29 131.7 98 70.4
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 2.9e-29 131.7 84 77.4
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.9e-28 129.0 93 66.7
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 9.3e-28 126.7 94 66.0
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.7e-27 125.2 74 81.1
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 3.5e-27 124.8 73 82.2
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 4.6e-27 124.4 75 81.3
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 6.0e-27 124.0 89 66.3
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.0e-26 123.2 94 67.0
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 1.8e-26 122.5 86 69.8
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.5e-25 119.4 73 80.8
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.9e-25 119.0 98 62.2
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 2.5e-25 118.6 73 83.6
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.3e-25 118.2 84 71.4
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 7.4e-25 117.1 83 66.3
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 9.6e-25 116.7 77 75.3
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.6e-24 115.9 73 78.1
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.1e-24 115.5 72 80.6
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 4.8e-24 114.4 92 65.2
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 5.3e-23 110.9 93 61.3
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 9.0e-23 110.2 73 76.7
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.0e-22 109.0 71 76.1
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 2.0e-22 109.0 76 71.1
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 5.8e-22 107.5 69 73.9
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 2.9e-21 105.1 80 67.5
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 6.5e-21 104.0 72 69.4
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 6.0e-19 97.4 84 61.9
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 8.7e-18 93.6 79 58.2
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 4.8e-16 87.8 63 68.3
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 8.2e-16 87.0 108 49.1


User provided reference genes

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