Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 3.8e-157 558.1 285 100.0
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 5.8e-105 384.8 288 71.9
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 8.0e-99 364.4 293 68.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.2e-96 356.3 290 70.7
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.5e-92 343.6 290 69.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 5.6e-92 341.7 288 68.8
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.1e-83 313.2 300 62.0
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 8.4e-72 274.6 284 57.0
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.9e-71 273.5 294 57.5
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.9e-71 273.5 275 57.8
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.2e-70 270.8 247 61.5
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.1e-70 270.0 294 57.1
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.3e-69 267.3 268 58.2
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.3e-69 266.5 227 64.8
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.9e-68 263.5 232 61.6
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 4.3e-68 262.3 242 60.3
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.8e-67 259.6 303 54.8
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 4.8e-67 258.8 254 57.9
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.2e-65 254.2 259 55.6
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.5e-65 253.8 232 60.8
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 2.0e-65 253.4 215 63.7
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 2.6e-65 253.1 284 53.9
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.4e-65 252.7 254 57.5
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 5.8e-65 251.9 213 61.5
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 5.8e-65 251.9 213 61.5
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 5.8e-65 251.9 262 54.6
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.7e-64 250.4 257 54.1
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 2.2e-64 250.0 254 57.1
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 2.9e-64 249.6 208 63.9
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 2.9e-64 249.6 227 61.7
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.9e-64 248.8 300 51.0
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.1e-63 247.7 256 55.5
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.2e-63 246.1 255 54.9
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 7.1e-63 245.0 257 53.7
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.6e-62 243.8 271 53.9
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.7e-62 243.0 256 55.5
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.6e-62 242.3 243 56.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.8e-61 240.4 293 48.8
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.3e-61 240.0 282 54.6
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 5.1e-61 238.8 278 51.4
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.1e-60 237.7 227 59.0
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.9e-60 236.9 259 52.5
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 5.6e-60 235.3 260 53.8
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 5.6e-60 235.3 245 54.3
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 9.6e-60 234.6 245 54.7
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 9.6e-60 234.6 227 58.6
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 1.3e-59 234.2 269 49.8
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 2.8e-59 233.0 257 52.5
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 3.7e-59 232.6 217 60.4
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 3.7e-59 232.6 254 52.4
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.4e-58 230.7 227 57.3
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 2.4e-58 229.9 249 54.2
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 6.9e-58 228.4 259 52.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 9.0e-58 228.0 259 52.5
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.2e-57 227.6 240 54.6
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.5e-57 227.3 256 51.2
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 4.5e-57 225.7 273 47.3
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 5.8e-57 225.3 283 45.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 7.6e-57 224.9 256 51.6
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 7.6e-57 224.9 256 51.6
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.7e-56 223.8 280 47.9
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.7e-56 223.8 250 52.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 2.2e-56 223.4 254 51.6
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 2.2e-56 223.4 266 51.1
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 2.9e-56 223.0 267 51.3
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 3.8e-56 222.6 230 53.5
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.8e-56 222.6 259 49.0
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.9e-56 222.2 292 49.3
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 6.4e-56 221.9 265 47.9
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 5.5e-55 218.8 267 47.6
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 7.1e-55 218.4 239 51.0
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 9.3e-55 218.0 239 51.0
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.3e-53 213.4 246 49.6
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 3.0e-53 213.0 231 54.5
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 6.7e-53 211.8 231 52.4
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 6.7e-53 211.8 240 50.8
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 9.6e-52 208.0 246 47.6
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 3.7e-51 206.1 223 53.8
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.2e-49 201.1 354 38.1
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 7.6e-49 198.4 276 47.8
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 7.6e-49 198.4 167 59.3
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.9e-48 196.4 285 44.2
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 7.9e-46 188.3 162 62.3
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 2.9e-40 169.9 205 49.8
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.4e-39 167.5 204 53.9
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 2.7e-38 163.3 214 49.5
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 2.3e-37 160.2 244 38.9
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 9.1e-34 148.3 152 59.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 1.2e-33 147.9 285 33.7
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.0e-33 147.1 86 80.2
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.0e-32 144.8 209 40.2
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.2e-32 143.7 264 38.3
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 3.8e-24 116.3 150 48.0
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.1e-23 114.8 125 56.0
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 5.3e-18 95.9 188 42.6
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 5.3e-18 95.9 205 38.5
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 5.9e-17 92.4 221 30.3
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 7.7e-17 92.0 152 43.4
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 7.7e-17 92.0 182 35.7
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 2.5e-15 87.0 62 72.6
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 6.1e-14 82.4 117 35.9
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 1.4e-13 81.3 204 30.9
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.0e-12 77.4 83 49.4
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.9e-07 60.8 116 37.1
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 9.4e-07 58.5 94 42.6
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 9.4e-07 58.5 94 42.6


User provided reference genes

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