Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 3.4e-86 321.6 161 100.0
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 7.1e-44 181.0 171 63.2
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 2.3e-42 176.0 167 62.3
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 3.9e-42 175.3 168 61.3
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 3.9e-42 175.3 160 63.8
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 6.7e-42 174.5 158 60.8
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 1.1e-41 173.7 145 66.9
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.1e-41 173.7 167 58.7
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.5e-41 173.3 165 59.4
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 8.2e-40 167.5 152 61.8
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 2.4e-39 166.0 170 59.4
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.2e-37 159.5 167 53.3
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.2e-37 159.5 151 57.6
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 3.8e-37 158.7 192 53.1
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 4.9e-37 158.3 177 54.2
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 1.1e-36 157.1 148 58.1
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 3.2e-36 155.6 170 54.7
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 5.5e-36 154.8 171 57.3
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 1.6e-35 153.3 163 54.0
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.6e-35 153.3 141 61.0
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.6e-35 153.3 157 56.7
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 2.7e-35 152.5 171 53.2
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 6.0e-35 151.4 158 51.9
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 6.0e-35 151.4 153 56.2
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 1.8e-34 149.8 161 52.8
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 8.7e-34 147.5 170 52.4
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 1.1e-33 147.1 157 56.7
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 1.1e-33 147.1 71 91.5
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 1.5e-33 146.7 149 53.7
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.9e-33 146.4 160 51.2
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 3.3e-33 145.6 143 58.0
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 3.3e-33 145.6 117 63.2
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 3.3e-33 145.6 161 52.2
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 5.7e-33 144.8 117 62.4
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 9.7e-33 144.1 153 53.6
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 1.6e-32 143.3 76 88.2
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 1.6e-32 143.3 132 57.6
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 2.2e-32 142.9 173 50.9
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 2.8e-32 142.5 182 49.5
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 3.7e-32 142.1 129 62.0
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 6.3e-32 141.4 127 58.3
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 8.2e-32 141.0 100 67.0
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 8.2e-32 141.0 173 49.7
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 8.2e-32 141.0 161 52.2
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.1e-31 140.6 148 54.7
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.1e-31 140.6 148 54.7
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.1e-31 140.6 180 51.7
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.4e-31 140.2 159 51.6
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.8e-31 139.8 148 54.7
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 2.4e-31 139.4 152 52.6
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.1e-31 139.0 148 54.1
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 5.3e-31 138.3 119 61.3
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 1.5e-30 136.7 151 55.6
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 1.5e-30 136.7 154 53.2
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 1.5e-30 136.7 86 74.4
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 2.0e-30 136.3 83 73.5
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 3.4e-30 135.6 89 73.0
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 3.4e-30 135.6 88 71.6
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 4.5e-30 135.2 109 63.3
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 4.5e-30 135.2 126 58.7
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 5.9e-30 134.8 150 50.7
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 7.6e-30 134.4 66 90.9
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 1.0e-29 134.0 125 54.4
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.3e-29 133.7 139 52.5
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.3e-29 133.7 106 62.3
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 1.7e-29 133.3 76 80.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 1.7e-29 133.3 131 59.5
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.7e-29 133.3 135 56.3
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 2.2e-29 132.9 97 68.0
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 2.2e-29 132.9 68 83.8
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 8.5e-29 131.0 91 65.9
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 8.5e-29 131.0 162 50.0
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 8.5e-29 131.0 168 50.6
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 8.5e-29 131.0 68 83.8
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.1e-28 130.6 170 50.6
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.1e-28 130.6 126 55.6
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.1e-28 130.6 71 80.3
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.1e-28 130.6 71 80.3
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 2.5e-28 129.4 93 64.5
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 2.5e-28 129.4 93 64.5
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 2.5e-28 129.4 93 64.5
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 2.5e-28 129.4 88 72.7
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 3.2e-28 129.0 107 63.6
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.2e-28 129.0 148 51.4
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 3.2e-28 129.0 71 78.9
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 3.2e-28 129.0 141 51.1
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 3.2e-28 129.0 97 67.0
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 3.2e-28 129.0 71 78.9
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 4.2e-28 128.6 162 50.6
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 7.2e-28 127.9 144 50.7
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 2.1e-27 126.3 157 50.3
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 2.7e-27 125.9 148 50.0
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 3.6e-27 125.6 72 77.8
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 3.6e-27 125.6 148 50.0
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 4.6e-27 125.2 94 63.8
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 6.7e-26 121.3 170 49.4
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 8.8e-26 120.9 155 47.7
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 3.3e-25 119.0 81 70.4
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 3.3e-25 119.0 66 75.8
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 4.3e-25 118.6 121 52.9
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 1.7e-24 116.7 88 60.2
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 3.7e-24 115.5 149 45.6
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.4e-23 113.6 57 84.2
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 6.9e-23 111.3 102 53.9
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.0e-13 80.9 93 40.9
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 2.9e-13 79.3 100 39.0
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 1.1e-07 60.8 113 43.4
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 1.6e-06 57.0 77 39.0


User provided reference genes

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