Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0005304 Lotus japonicus HOM05D001309 ORTHO05D048478 3.7e-34 147.5 69 100.0
EL10Ac5g11722 Beta vulgaris HOM05D000107 ORTHO05D000062 4.5e-11 70.9 62 53.2
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-11 70.1 41 73.2
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-10 68.9 62 51.6
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.9e-09 65.5 63 47.6
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.9e-09 65.5 63 47.6
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.9e-09 65.5 63 47.6
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.9e-09 65.5 63 47.6
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.9e-09 65.5 63 47.6
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 1.9e-09 65.5 64 46.9
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.2e-09 64.7 63 47.6
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-09 64.3 63 46.0
CSS0044341 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-09 64.3 63 46.0
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-09 63.9 63 46.0
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-09 63.9 64 45.3
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 5.4e-09 63.9 64 46.9
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.4e-09 63.9 66 47.0
Nitab4.5_0007523g0040 Nicotiana tabacum HOM05D000107 ORTHO05D000062 9.3e-09 63.2 41 73.2
CSS0026161 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-08 62.8 66 51.5
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-08 61.6 66 50.0
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-08 61.6 66 50.0
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-08 61.6 66 50.0
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-08 61.6 66 50.0
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-08 61.6 66 50.0
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-08 61.6 67 41.8
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-08 61.2 68 44.1
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-08 60.5 67 40.3
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-07 59.7 60 45.0
HanXRQChr05g0153541 Helianthus annuus HOM05D000107 ORTHO05D000062 1.8e-07 58.9 67 41.8
Nitab4.5_0000193g0070 Nicotiana tabacum HOM05D001309 ORTHO05D048478 1.8e-07 58.9 36 69.4
Atru.chr3.1416 Acer truncatum HOM05D000107 ORTHO05D000062 2.3e-07 58.5 68 42.6
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.9e-07 57.8 67 41.8
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 6.7e-07 57.0 62 43.5
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 55.8 68 44.1
AUR62033022 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-06 55.5 63 41.3
AUR62033024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-06 55.5 63 41.3
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.9e-06 55.5 66 39.4
Rhsim07G0167400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-06 55.5 66 40.9
AUR62027609 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-06 55.1 63 41.3
ECA232G4762 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.5e-06 55.1 67 37.3
TAR528G0007 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.5e-06 55.1 67 40.3
AUR62040356 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.3e-06 54.3 63 39.7
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 4.3e-06 54.3 67 38.8
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.3e-06 54.3 60 43.3
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 5.6e-06 53.9 67 40.3
AUR62024349 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.6e-06 53.1 63 39.7
ECA061G0003 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.6e-06 53.1 59 42.4
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 9.6e-06 53.1 59 39.0
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 9.6e-06 53.1 59 39.0


User provided reference genes

Program Settings