Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 6.9e-248 860.1 419 100.0
Lj4g0005513 Lotus japonicus HOM05D032889 ORTHO05D003767 7.5e-154 547.7 304 88.5
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 4.0e-30 136.7 429 28.9
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 1.3e-28 131.7 419 28.6
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 2.9e-28 130.6 413 30.0
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 8.4e-28 129.0 418 25.6
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 7.1e-27 125.9 417 26.4
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 2.7e-26 124.0 423 26.5
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 1.0e-25 122.1 415 26.7
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 1.0e-25 122.1 425 28.5
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 1.3e-25 121.7 444 25.5
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 1.1e-24 118.6 426 27.2
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 1.1e-24 118.6 426 27.2
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 1.1e-24 118.6 413 26.4
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 1.9e-24 117.9 434 26.5
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 7.3e-24 115.9 425 28.2
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 1.2e-23 115.2 422 25.6
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 6.2e-23 112.8 219 34.2
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 8.1e-23 112.5 415 27.7
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 3.1e-22 110.5 206 34.5
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 6.9e-22 109.4 115 53.9
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 3.4e-21 107.1 199 33.2
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 9.3e-19 99.0 85 50.6
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.2e-18 98.6 209 33.5
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 2.1e-18 97.8 195 32.3
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 3.5e-18 97.1 164 35.4
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.5e-18 97.1 419 24.8
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 5.1e-17 93.2 112 42.0
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 8.7e-17 92.4 192 32.3
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 1.1e-16 92.0 208 31.2
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 1.1e-16 92.0 108 42.6
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.5e-16 91.7 191 33.0
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 1.5e-16 91.7 429 24.2
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 1.9e-16 91.3 126 39.7
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 1.9e-16 91.3 252 29.4
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 2.5e-16 90.9 449 28.1
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 2.5e-16 90.9 412 26.2
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 3.3e-16 90.5 87 46.0
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 3.3e-16 90.5 81 48.1
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 4.3e-16 90.1 119 41.2
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 4.3e-16 90.1 426 24.6
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 5.6e-16 89.7 432 26.4
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 9.6e-16 89.0 108 41.7
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.3e-15 88.6 139 36.7
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 1.6e-15 88.2 445 26.7
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 1.6e-15 88.2 108 38.9
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.6e-15 88.2 108 38.9
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 2.8e-15 87.4 110 41.8
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 2.8e-15 87.4 200 34.5
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 3.6e-15 87.0 79 50.6
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 4.8e-15 86.7 109 41.3
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 4.8e-15 86.7 200 34.0
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 4.8e-15 86.7 427 24.8
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 8.1e-15 85.9 440 23.9
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 8.1e-15 85.9 200 34.0
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 1.1e-14 85.5 84 46.4
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 1.1e-14 85.5 120 40.0
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.4e-14 85.1 119 40.3
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.8e-14 84.7 110 40.9
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 3.1e-14 84.0 388 25.5
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 4.0e-14 83.6 79 49.4
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 4.0e-14 83.6 103 43.7
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 9.0e-14 82.4 234 26.5
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 9.0e-14 82.4 234 26.5
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 9.0e-14 82.4 87 47.1
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 1.2e-13 82.0 240 27.1
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 2.0e-13 81.3 247 27.1
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 2.0e-13 81.3 247 27.1
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 3.4e-13 80.5 166 33.1
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 4.5e-13 80.1 87 41.4
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 5.8e-13 79.7 87 40.2
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 1.7e-12 78.2 451 24.4
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.7e-12 78.2 57 56.1
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 2.9e-12 77.4 85 40.0
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 3.8e-12 77.0 116 41.4
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 3.8e-12 77.0 93 39.8
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 4.9e-12 76.6 90 40.0
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.9e-12 76.6 94 41.5
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 6.4e-12 76.3 189 28.6
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 6.4e-12 76.3 136 31.6
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 6.4e-12 76.3 87 37.9
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 6.4e-12 76.3 234 26.9
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 8.4e-12 75.9 186 32.8
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 1.1e-11 75.5 133 30.8
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.1e-11 75.5 66 53.0
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.4e-11 75.1 86 40.7
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 1.4e-11 75.1 93 39.8
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 1.9e-11 74.7 168 30.4
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.9e-11 74.7 93 39.8
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 2.4e-11 74.3 135 29.6
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 2.4e-11 74.3 133 30.1
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 2.4e-11 74.3 86 39.5
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 2.4e-11 74.3 184 29.9
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 3.2e-11 73.9 138 35.5
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 3.2e-11 73.9 87 36.8
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 4.2e-11 73.6 123 36.6
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.2e-11 73.6 93 39.8
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 5.4e-11 73.2 77 44.2
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 5.4e-11 73.2 425 22.6
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 5.4e-11 73.2 76 46.1
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.2e-10 72.0 111 38.7
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 1.2e-10 72.0 168 28.6
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.6e-10 71.6 444 22.7
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 2.1e-10 71.2 100 38.0
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.7e-10 70.9 55 56.4
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 3.5e-10 70.5 134 35.1
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.5e-10 70.5 94 40.4
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 4.6e-10 70.1 118 34.7
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 4.6e-10 70.1 93 37.6
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.6e-10 70.1 144 35.4
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 6.0e-10 69.7 120 31.7
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 6.0e-10 69.7 120 37.5
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 6.0e-10 69.7 75 50.7
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 7.9e-10 69.3 149 31.5
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 7.9e-10 69.3 134 29.9
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 7.9e-10 69.3 131 35.1
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.0e-09 68.9 120 34.2
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 1.0e-09 68.9 93 36.6
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 1.0e-09 68.9 93 36.6
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 1.0e-09 68.9 85 42.4
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 1.8e-09 68.2 93 35.5
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 1.8e-09 68.2 128 32.0
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 1.8e-09 68.2 58 50.0
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.8e-09 68.2 261 25.3
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 3.0e-09 67.4 78 43.6
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 5.1e-09 66.6 348 19.8
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 5.1e-09 66.6 98 38.8
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.1e-08 65.5 139 33.1
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 1.1e-08 65.5 52 53.8
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.9e-08 64.7 180 26.7
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 2.5e-08 64.3 116 31.0
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 2.5e-08 64.3 75 42.7
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 2.5e-08 64.3 128 35.9
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 2.5e-08 64.3 141 32.6
VMungo0647G2380 Vigna mungo HOM05D058389 ORTHO05D003767 2.5e-08 64.3 69 44.9
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 4.3e-08 63.5 73 38.4
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 5.6e-08 63.2 84 33.3
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 5.6e-08 63.2 78 39.7
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 5.6e-08 63.2 77 40.3
MELO3C011152.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.3e-07 62.0 116 32.8
Lalb_Chr14g0372311 Lupinus albus HOM05D004021 ORTHO05D003767 1.6e-07 61.6 118 33.1
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 2.8e-07 60.8 98 35.7
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 8.1e-07 59.3 221 25.3
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.4e-06 58.5 107 29.9
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 1.4e-06 58.5 55 45.5
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 3.1e-06 57.4 54 50.0
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 5.3e-06 56.6 127 30.7
Lj1g0026931 Lotus japonicus HOM05D032889 ORTHO05D235917 6.9e-06 56.2 119 34.5
PSO782G1327 Papaver somniferum HOM05D004021 ORTHO05D003767 9.0e-06 55.8 51 49.0


User provided reference genes

Program Settings