Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0003242 Lotus japonicus HOM05D006902 ORTHO05D008468 3.3e-83 312.0 197 100.0
Ca_18489_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 2.2e-47 193.0 197 73.1
Ca_29542_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 2.2e-47 193.0 197 73.1
TPR.G32415 Trifolium pratense HOM05D006902 ORTHO05D008468 2.2e-47 193.0 198 70.7
Medtr4g090910 Medicago truncatula HOM05D006902 ORTHO05D008468 4.3e-43 178.7 199 67.8
Phvul.002G222700 Phaseolus vulgaris HOM05D006902 ORTHO05D008468 1.9e-38 163.3 177 72.9
VMungo0251G2276 Vigna mungo HOM05D006902 ORTHO05D008468 1.9e-38 163.3 177 72.9
Psat7g109600 Pisum sativum HOM05D006902 ORTHO05D008468 1.2e-37 160.6 201 62.2
Glyma.07G190800 Glycine max HOM05D006902 ORTHO05D008468 7.9e-37 157.9 174 71.8
Lalb_Chr16g0383411 Lupinus albus HOM05D006902 ORTHO05D008468 1.9e-35 153.3 195 65.1
Glyma.08G058500 Glycine max HOM05D006902 ORTHO05D008468 1.5e-32 143.7 177 68.4
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea HOM05D006902 ORTHO05D008468 1.6e-29 133.7 176 64.8
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea HOM05D006902 ORTHO05D008468 6.1e-29 131.7 176 64.2
Atru.chr10.2001 Acer truncatum HOM05D006902 ORTHO05D008468 1.1e-27 127.5 182 47.3
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 1.5e-27 127.1 187 53.5
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 2.8e-26 122.9 179 51.4
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 3.7e-26 122.5 181 60.8
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 4.8e-26 122.1 198 53.5
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 6.3e-26 121.7 185 51.4
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 8.2e-26 121.3 188 52.1
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 1.8e-25 120.2 191 43.5
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 2.4e-25 119.8 180 49.4
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 3.1e-25 119.4 198 51.0
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 4.1e-25 119.0 213 46.0
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 4.1e-25 119.0 199 42.2
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 5.3e-25 118.6 200 49.5
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 5.3e-25 118.6 187 53.5
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 5.3e-25 118.6 203 44.8
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 1.5e-24 117.1 166 44.6
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 1.5e-24 117.1 199 56.3
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 2.0e-24 116.7 198 52.5
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 2.6e-24 116.3 187 51.9
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 2.6e-24 116.3 188 41.0
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 1.0e-23 114.4 166 44.6
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 1.3e-23 114.0 185 41.1
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 2.2e-23 113.2 179 54.2
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 2.9e-23 112.8 180 48.3
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 2.9e-23 112.8 202 48.0
Eucgr.D00710 Eucalyptus grandis HOM05D006902 ORTHO05D008468 6.5e-23 111.7 170 61.2
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 6.5e-23 111.7 196 45.9
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 1.1e-22 110.9 191 52.4
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 1.1e-22 110.9 191 52.4
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 5.5e-22 108.6 189 55.6
Eucgr.L03594 Eucalyptus grandis HOM05D006902 ORTHO05D008468 1.2e-21 107.5 169 60.4
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.2e-21 107.5 177 45.8
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 1.2e-21 107.5 185 50.8
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 1.6e-21 107.1 172 52.3
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 2.7e-21 106.3 187 51.9
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 6.1e-21 105.1 185 50.3
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 6.1e-21 105.1 160 41.2
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 6.7e-20 101.7 181 53.6
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 8.8e-20 101.3 197 39.6
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 2.6e-19 99.8 187 43.3
Aqoxy7G03119 Aquilegia oxysepala HOM05D006902 ORTHO05D008468 1.7e-18 97.1 183 45.4
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 1.7e-18 97.1 196 51.0
THA.LOC104809549 Tarenaya hassleriana HOM05D006902 ORTHO05D008468 2.8e-18 96.3 188 51.1
QL05p081948 Quercus lobata HOM05D006902 ORTHO05D008468 4.8e-18 95.5 178 52.2
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 2.4e-17 93.2 195 45.6
EL10Ac8g20614 Beta vulgaris HOM05D006902 ORTHO05D008468 4.1e-17 92.4 204 46.6
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 2.6e-16 89.7 167 49.7
AT1G11240 Arabidopsis thaliana HOM05D006902 ORTHO05D008468 5.9e-16 88.6 177 45.2
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 5.9e-16 88.6 195 48.7
Aa31LG1G3550 Aethionema arabicum HOM05D006902 ORTHO05D008468 7.7e-16 88.2 188 50.0
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 7.7e-16 88.2 188 50.0
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 1.3e-15 87.4 187 36.9
Carub.0001s1082 Capsella rubella HOM05D006902 ORTHO05D008468 1.7e-15 87.0 180 46.1
Nn8g40519 Nelumbo nucifera HOM05D006902 ORTHO05D008468 1.7e-15 87.0 169 39.6
vmacro15868 Vaccinium macrocarpon HOM05D006902 ORTHO05D008468 1.7e-15 87.0 254 34.6
C05p09500 Brassica napus HOM05D006902 ORTHO05D008468 6.5e-15 85.1 180 50.0
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 6.5e-15 85.1 184 48.4
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 8.5e-15 84.7 170 46.5
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 1.9e-14 83.6 168 35.1
BcaNung04470 Brassica carinata HOM05D006902 ORTHO05D008468 2.5e-14 83.2 180 50.0
A06p07900 Brassica napus HOM05D006902 ORTHO05D008468 2.5e-14 83.2 177 50.3
BraA06t23989Z Brassica rapa HOM05D006902 ORTHO05D008468 2.5e-14 83.2 177 50.3
ECA234G0685 Erigeron canadensis HOM05D006902 ORTHO05D008468 2.5e-14 83.2 128 52.3
BolC5t29692H Brassica oleracea HOM05D006902 ORTHO05D008468 3.2e-14 82.8 177 50.3
PGR004G1238 Punica granatum HOM05D006902 ORTHO05D008468 3.2e-14 82.8 172 52.3
Cpa.g.sc27.115 Carica papaya HOM05D006902 ORTHO05D008468 5.5e-14 82.0 130 45.4
Sp1g09900 Schrenkiella parvula HOM05D006902 ORTHO05D008468 9.4e-14 81.3 177 46.9
Ah.14g088940 Amaranthus hybridus HOM05D006902 ORTHO05D008468 1.2e-13 80.9 191 46.6
AL1G22260 Arabidopsis lyrata HOM05D006902 ORTHO05D008468 2.1e-13 80.1 177 44.1
SGA_v2.0_scaffold159G37666 Striga asiatica HOM05D006902 ORTHO05D008468 4.7e-13 79.0 169 47.3
BolC8t49055H Brassica oleracea HOM05D006902 ORTHO05D008468 3.0e-12 76.3 177 49.2
ATR0580G203 Amborella trichopoda HOM05D006902 ORTHO05D008468 5.2e-12 75.5 204 37.7
CARHR011470 Cardamine hirsuta HOM05D006902 ORTHO05D008468 5.2e-12 75.5 182 50.0
FAN25G0692 Fragaria x ananassa HOM05D006902 ORTHO05D008468 5.2e-12 75.5 154 39.6
Thhalv10008794m.g Eutrema salsugineum HOM05D006902 ORTHO05D008468 5.7e-11 72.0 195 47.7
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.3e-10 70.9 174 47.7
Os03g0353500 Oryza sativa ssp. japonica HOM05D006902 ORTHO05D008468 1.7e-10 70.5 186 39.8
SEGI_26187 Sequoiadendron giganteum HOM05D006902 ORTHO05D008468 2.8e-10 69.7 205 39.0
FAN23G2525 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.4e-09 67.4 117 43.6
COL.COLO4_31574 Corchorus olitorius HOM05D000306 ORTHO05D000410 2.4e-09 66.6 157 49.0
unitig_8.g3353 Utricularia gibba HOM05D006902 ORTHO05D008468 7.0e-09 65.1 138 46.4
BcaC07g38645 Brassica carinata HOM05D006902 ORTHO05D008468 9.1e-09 64.7 176 47.2
FAN19G2227 Fragaria x ananassa HOM05D006902 ORTHO05D008468 9.1e-09 64.7 117 41.9
FAN26G1405 Fragaria x ananassa HOM05D006902 ORTHO05D008468 9.1e-09 64.7 117 41.9
BcaC05g24999 Brassica carinata HOM05D006902 ORTHO05D008468 1.2e-08 64.3 107 57.9
Zm00001eb394590 Zea mays HOM05D006902 ORTHO05D008468 2.0e-08 63.5 186 41.4
Peaxi162Scf00371g01024 Petunia axillaris HOM05D006902 ORTHO05D008468 4.5e-08 62.4 174 37.4
Cpa.g.c36644 Carica papaya HOM05D006902 ORTHO05D008468 2.9e-07 59.7 35 74.3
FAN11G0740 Fragaria x ananassa HOM05D000306 ORTHO05D000410 4.2e-06 55.8 92 39.1
BcaC05g24986 Brassica carinata HOM05D006902 ORTHO05D008468 9.4e-06 54.7 120 36.7


User provided reference genes

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