Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 3.7e-94 348.2 175 100.0
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 1.7e-78 296.2 176 85.8
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 7.7e-76 287.3 177 83.1
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 1.0e-72 276.9 176 79.0
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 3.5e-68 261.9 160 82.5
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 2.3e-64 249.2 176 73.3
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 1.5e-63 246.5 160 78.8
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 4.2e-58 228.4 176 64.2
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 7.2e-58 227.6 175 68.6
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 5.2e-56 221.5 176 67.6
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 2.6e-55 219.2 176 63.1
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 8.3e-54 214.2 167 62.9
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 1.2e-52 210.3 169 63.3
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.0e-52 209.5 167 61.1
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 2.0e-52 209.5 169 62.7
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 4.5e-52 208.4 167 61.7
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 7.7e-52 207.6 169 62.7
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.3e-51 206.8 167 62.3
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 8.5e-51 204.1 176 61.9
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.1e-50 203.8 167 60.5
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 1.5e-50 203.4 178 63.5
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 7.2e-50 201.1 168 59.5
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 9.4e-50 200.7 177 61.0
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 2.1e-49 199.5 170 61.2
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 2.3e-48 196.1 169 59.8
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 4.0e-48 195.3 167 58.7
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 4.0e-48 195.3 171 61.4
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 5.2e-48 194.9 171 57.9
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 5.2e-48 194.9 168 61.3
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 5.2e-48 194.9 174 56.3
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.5e-47 193.4 172 58.1
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 1.5e-47 193.4 171 57.3
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 2.6e-47 192.6 170 60.6
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 2.6e-47 192.6 170 60.6
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 2.6e-47 192.6 181 56.4
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 2.6e-47 192.6 181 56.4
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 2.6e-47 192.6 177 57.1
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.4e-47 192.2 175 56.6
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.4e-47 192.2 167 57.5
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 7.5e-47 191.0 165 59.4
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 9.8e-47 190.7 164 57.9
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.3e-46 190.3 169 56.8
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 1.7e-46 189.9 162 58.0
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.7e-46 189.9 167 56.9
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 3.7e-46 188.7 166 57.8
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 3.7e-46 188.7 166 57.8
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 3.7e-46 188.7 163 58.3
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 4.9e-46 188.3 165 58.8
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 6.3e-46 188.0 163 57.7
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 8.3e-46 187.6 165 58.2
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 8.3e-46 187.6 169 58.0
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.1e-45 187.2 167 56.3
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 1.8e-45 186.4 162 58.0
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 1.8e-45 186.4 167 55.7
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.4e-45 186.0 165 59.4
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 3.1e-45 185.7 162 58.6
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 4.1e-45 185.3 162 58.0
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 4.1e-45 185.3 166 57.8
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 9.1e-45 184.1 177 54.2
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 2.0e-44 183.0 166 54.8
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 2.0e-44 183.0 155 60.6
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.7e-44 182.6 178 55.1
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 3.5e-44 182.2 162 58.0
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 3.5e-44 182.2 162 58.0
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 5.9e-44 181.4 167 55.7
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 7.7e-44 181.0 163 57.1
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 1.3e-43 180.3 165 56.4
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 2.3e-43 179.5 162 57.4
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.3e-43 179.5 172 52.9
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 3.8e-43 178.7 168 53.6
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 6.6e-43 177.9 196 50.0
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.5e-42 176.8 163 54.0
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 7.2e-42 174.5 156 60.3
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 7.2e-42 174.5 183 53.6
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 9.5e-42 174.1 168 56.0
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 1.2e-41 173.7 167 54.5
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 2.1e-41 172.9 163 54.0
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 3.6e-41 172.2 163 54.0
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 4.7e-41 171.8 156 59.0
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 4.7e-41 171.8 156 59.0
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 3.0e-40 169.1 165 51.5
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 5.2e-40 168.3 187 50.3
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 6.8e-40 167.9 163 55.2
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.2e-39 167.2 159 57.2
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 3.4e-39 165.6 169 50.9
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 5.7e-39 164.9 145 62.1
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 5.7e-39 164.9 130 61.5
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 7.5e-39 164.5 149 58.4
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.2e-38 162.9 161 53.4
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 1.4e-37 160.2 162 51.9
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 1.8e-37 159.8 156 55.1
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 5.4e-37 158.3 148 54.1
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.2e-36 157.1 164 53.0
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 2.0e-36 156.4 163 51.5
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 7.8e-36 154.5 170 50.6
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 7.8e-36 154.5 218 42.7
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 1.3e-35 153.7 133 62.4
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.3e-35 153.7 213 42.7
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 1.7e-35 153.3 171 44.4
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.3e-35 152.9 154 52.6
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.3e-35 152.9 147 55.8
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 5.0e-35 151.8 163 50.3
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 1.1e-34 150.6 164 50.6
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.5e-34 150.2 221 39.8
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 3.3e-34 149.1 162 51.9
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 5.6e-34 148.3 163 49.7
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 5.6e-34 148.3 130 57.7
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 6.2e-33 144.8 140 55.7
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.4e-32 143.7 140 54.3
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 3.1e-32 142.5 139 56.1
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 3.1e-32 142.5 145 53.8
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 6.8e-32 141.4 145 52.4
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 1.5e-31 140.2 137 55.5
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 1.5e-31 140.2 164 44.5
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 3.4e-31 139.0 144 48.6
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 5.8e-31 138.3 145 53.1
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 2.9e-30 136.0 153 50.3
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 6.4e-30 134.8 266 33.1
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.4e-29 133.7 129 53.5
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 5.4e-29 131.7 129 58.1
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 2.0e-28 129.8 161 44.1
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 2.3e-27 126.3 146 49.3
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.0e-27 125.9 171 43.9
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 3.0e-27 125.9 154 49.4
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 3.0e-27 125.9 134 52.2
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 5.0e-27 125.2 173 43.9
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 9.5e-26 120.9 159 43.4
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 3.6e-25 119.0 152 45.4
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 2.3e-24 116.3 93 72.0
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 5.2e-24 115.2 74 67.6
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 6.8e-24 114.8 171 43.9
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 5.8e-23 111.7 164 39.0
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 9.8e-23 110.9 105 58.1
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 2.9e-22 109.4 113 50.4
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 2.9e-22 109.4 113 56.6
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.2e-20 104.0 91 58.2
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.6e-20 103.6 68 61.8
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 7.8e-20 101.3 88 59.1
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.0e-19 100.9 105 54.3
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 3.9e-19 99.0 84 64.3
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.5e-18 97.1 80 63.8
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.2e-17 94.0 80 61.2
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 1.2e-15 87.4 169 34.3
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 7.6e-15 84.7 79 58.2
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 3.7e-14 82.4 111 47.7
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 1.3e-11 73.9 135 36.3
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 8.6e-11 71.2 167 31.1
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 3.6e-09 65.9 66 57.6
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 1.8e-08 63.5 51 70.6
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 2.4e-08 63.2 47 72.3
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.4e-07 59.3 44 72.7


User provided reference genes

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