Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.2e-230 802.7 396 100.0
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.1e-183 646.7 397 80.1
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.4e-180 635.2 378 82.5
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 4.4e-180 634.8 384 81.0
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 5.8e-180 634.4 380 81.8
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 7.6e-180 634.0 345 89.6
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.2e-179 632.5 391 81.1
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 4.9e-179 631.3 425 76.0
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.9e-178 629.4 420 76.2
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 2.7e-177 625.5 425 76.5
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.0e-176 623.6 344 85.5
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.3e-160 570.1 343 79.6
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 6.7e-160 567.8 343 78.4
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 3.7e-158 562.0 346 78.0
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 4.8e-158 561.6 348 77.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 6.2e-158 561.2 349 75.4
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.1e-157 560.5 349 75.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.4e-157 559.3 342 78.1
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.8e-155 552.0 346 76.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.1e-154 550.4 339 75.5
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.1e-154 550.4 339 75.5
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.4e-154 549.3 344 75.3
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.2e-154 548.9 339 75.2
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.2e-154 548.9 352 76.4
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.2e-154 548.5 344 74.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 5.5e-154 548.1 346 76.9
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.2e-153 547.0 346 75.7
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.0e-153 544.7 346 77.2
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.9e-151 539.7 346 74.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 5.6e-151 538.1 340 73.8
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.6e-150 536.6 340 72.6
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.8e-150 535.8 346 73.4
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.5e-148 530.0 341 73.0
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.0e-148 529.6 345 73.3
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 2.6e-148 529.3 341 73.6
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.4e-148 528.9 340 72.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 4.5e-148 528.5 340 72.4
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 7.6e-148 527.7 340 71.2
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.3e-147 526.9 331 73.7
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.9e-147 525.8 346 71.7
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 3.8e-147 525.4 385 66.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 3.8e-147 525.4 344 72.4
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 3.8e-147 525.4 349 72.8
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 4.9e-147 525.0 342 71.9
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 8.4e-147 524.2 344 72.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.1e-146 523.9 384 66.7
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.9e-146 523.1 345 72.8
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.5e-146 521.5 340 70.6
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 7.1e-146 521.2 372 66.7
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 9.3e-146 520.8 344 72.1
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.6e-145 520.0 338 71.3
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.7e-145 519.2 344 72.1
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 2.7e-145 519.2 344 70.9
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 4.6e-145 518.5 344 71.2
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 7.9e-145 517.7 394 64.0
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.0e-144 517.3 333 72.4
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 3.0e-144 515.8 381 66.4
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 5.1e-144 515.0 344 70.9
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.5e-143 513.5 354 70.3
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.5e-143 513.5 338 71.9
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 5.7e-143 511.5 344 70.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.6e-142 510.0 317 75.7
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.1e-141 507.3 329 72.0
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.8e-141 506.5 346 69.1
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 5.9e-140 501.5 333 69.7
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.9e-138 496.5 337 69.4
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.0e-136 490.7 348 68.7
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.4e-136 490.3 357 66.4
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 5.1e-136 488.4 391 62.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.7e-136 488.0 433 61.7
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.1e-135 487.3 412 60.0
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 5.7e-135 485.0 349 66.8
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.3e-134 483.8 330 70.3
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.4e-133 480.3 384 62.8
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 4.1e-133 478.8 395 64.3
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.9e-131 472.6 395 63.0
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.2e-130 469.2 339 65.8
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-128 463.8 344 66.0
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 3.1e-125 452.6 448 53.6
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 7.0e-125 451.4 339 63.7
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.7e-123 446.8 346 63.6
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 5.7e-119 431.8 434 54.6
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.6e-113 413.7 333 59.8
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.3e-110 404.1 258 74.4
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.8e-110 402.9 338 56.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 6.1e-105 385.2 346 56.4
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.5e-103 380.6 349 56.7
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.0e-103 380.2 348 58.6
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.4e-103 379.0 343 54.8
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-99 366.7 332 53.3
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 6.1e-89 332.0 255 63.5
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 5.2e-88 328.9 254 63.8
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 9.8e-87 324.7 348 50.3
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.4e-85 320.1 255 60.0
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.7e-76 290.0 300 51.3
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.3e-67 261.2 347 42.1
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.4e-61 239.2 347 43.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 7.1e-53 212.2 127 78.7
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.6e-50 202.6 130 72.3
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 2.5e-42 177.2 163 56.4
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.3e-41 174.9 183 50.8
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.5e-39 167.9 108 74.1
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.3e-25 121.7 125 51.2
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 4.1e-24 116.7 99 59.6
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 5.3e-24 116.3 350 28.0
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 2.2e-22 110.9 112 49.1
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.2e-22 110.9 79 58.2
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.5e-22 109.0 156 41.7
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.4e-21 108.2 82 64.6
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 9.4e-21 105.5 60 80.0
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 6.1e-20 102.8 78 64.1
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 5.3e-16 89.7 178 32.0
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 5.3e-16 89.7 224 31.7
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.3e-14 85.1 68 63.2
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 1.1e-13 82.0 335 26.0
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.2e-12 78.6 348 25.3
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 7.9e-12 75.9 303 26.1
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.3e-09 68.6 38 84.2


User provided reference genes

Program Settings