Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 5.0e-83 311.2 175 100.0
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.4e-56 223.4 176 75.0
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.2e-55 220.3 176 73.9
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.8e-54 215.7 172 75.0
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 5.9e-52 208.0 176 72.7
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 5.0e-51 204.9 176 69.3
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.7e-46 189.9 175 67.4
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.6e-44 183.3 171 69.6
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.0e-44 183.0 171 69.6
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 7.7e-44 181.0 175 65.1
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.0e-43 180.6 174 66.7
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 3.6e-41 172.2 172 61.0
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.6e-39 166.0 163 63.2
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.7e-38 162.2 172 62.2
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 3.2e-37 159.1 149 66.4
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 2.7e-36 156.0 167 63.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 5.9e-36 154.8 166 57.8
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 1.7e-35 153.3 172 56.4
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.7e-35 153.3 166 57.8
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 6.6e-35 151.4 172 56.4
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 8.6e-35 151.0 172 57.6
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 7.3e-34 147.9 172 58.1
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 9.5e-34 147.5 147 64.6
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 3.6e-33 145.6 155 61.3
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 6.2e-33 144.8 155 61.3
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 6.8e-32 141.4 154 60.4
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 2.6e-31 139.4 164 57.3
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.6e-31 139.4 175 52.6
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 3.4e-31 139.0 127 70.1
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 7.5e-31 137.9 171 57.3
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.7e-30 136.7 168 54.8
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 2.4e-29 132.9 173 55.5
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.4e-29 132.9 174 57.5
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.4e-29 132.9 173 54.3
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 9.2e-29 131.0 149 60.4
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 9.2e-29 131.0 155 55.5
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.6e-28 130.2 154 57.8
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.6e-28 130.2 127 66.1
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.6e-28 130.2 163 54.6
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.7e-28 129.4 166 54.2
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.7e-28 129.4 172 55.8
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.7e-28 129.4 163 54.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.7e-28 129.4 163 54.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.7e-28 129.4 163 54.6
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.7e-28 129.4 163 59.5
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.7e-28 129.4 167 53.3
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 2.7e-28 129.4 154 57.8
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 4.6e-28 128.6 133 61.7
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.0e-27 127.5 152 59.9
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.0e-27 127.5 171 50.3
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.3e-27 127.1 152 59.2
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 1.7e-27 126.7 154 57.8
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 1.7e-27 126.7 155 58.1
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.7e-27 126.7 149 60.4
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.9e-27 125.6 152 59.2
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 3.9e-27 125.6 152 59.2
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 3.9e-27 125.6 172 51.7
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 6.6e-27 124.8 138 60.9
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.1e-26 124.0 152 59.2
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 1.1e-26 124.0 142 54.9
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.1e-26 124.0 163 54.6
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 2.5e-26 122.9 154 58.4
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 5.6e-26 121.7 154 55.8
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 5.6e-26 121.7 133 62.4
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 5.6e-26 121.7 169 55.6
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 9.5e-26 120.9 153 58.2
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 2.1e-25 119.8 110 73.6
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 3.6e-25 119.0 149 53.7
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 1.1e-24 117.5 147 49.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 1.1e-24 117.5 168 51.2
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.1e-24 117.5 166 53.0
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 1.1e-24 117.5 99 73.7
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.1e-24 115.9 156 53.8
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 5.2e-24 115.2 149 54.4
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 5.2e-24 115.2 172 51.7
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 3.4e-23 112.5 172 47.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.4e-23 112.5 128 61.7
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.4e-23 112.1 149 52.3
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 4.4e-23 112.1 128 61.7
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 2.9e-22 109.4 128 58.6
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.9e-22 109.4 127 55.9
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.9e-22 108.6 128 60.2
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 6.4e-22 108.2 118 61.9
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 6.4e-22 108.2 95 74.7
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 6.4e-22 108.2 95 74.7
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 6.4e-22 108.2 95 73.7
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.4e-21 107.1 88 80.7
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 4.1e-21 105.5 174 51.1
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 7.1e-21 104.8 95 73.7
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.9e-19 99.0 78 79.5
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 8.6e-19 97.8 172 47.7
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.1e-18 97.4 85 77.6
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.3e-16 89.7 168 45.8
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.1e-16 89.4 109 59.6
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 5.2e-16 88.6 83 75.9
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.5e-15 87.0 92 66.3
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 2.2e-14 83.2 80 76.2
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 8.4e-14 81.3 99 54.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.9e-13 80.1 85 58.8
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 7.1e-13 78.2 83 61.4
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 3.5e-12 75.9 97 56.7
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.1e-11 72.0 82 64.6
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.6e-11 71.6 71 73.2
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 6.8e-08 61.6 155 45.8


User provided reference genes

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