Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 0.0e+00 1224.2 631 100.0
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 2.5e-302 1041.6 575 92.3
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 8.1e-301 1036.6 602 89.0
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 8.6e-295 1016.5 575 90.1
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.5e-294 1015.8 597 84.6
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 8.1e-293 1010.0 582 89.0
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 5.2e-292 1007.3 580 85.5
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 4.4e-291 1004.2 580 88.8
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 1.5e-278 962.6 584 80.8
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 3.4e-275 951.4 587 79.4
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 5.4e-273 944.1 542 89.5
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 9.3e-273 943.3 592 77.9
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 2.1e-272 942.2 578 79.6
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 7.9e-272 940.3 581 78.5
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 1.0e-271 939.9 593 78.4
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 1.0e-271 939.9 588 82.3
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.3e-271 938.7 572 80.8
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 2.3e-271 938.7 607 75.9
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 3.9e-271 937.9 600 76.7
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 6.7e-271 937.2 584 82.0
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 1.5e-270 936.0 588 78.9
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 1.9e-270 935.6 582 78.9
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 2.5e-270 935.3 592 81.4
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 2.8e-269 931.8 610 75.4
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 3.7e-269 931.4 584 80.8
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 8.1e-269 930.2 579 77.7
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 8.1e-269 930.2 582 79.0
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 1.1e-268 929.9 577 77.5
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 1.4e-268 929.5 580 79.3
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 9.0e-268 926.8 579 77.5
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 2.0e-267 925.6 577 78.0
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 3.4e-267 924.9 584 78.4
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 5.8e-267 924.1 593 77.6
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 5.8e-267 924.1 613 74.7
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 5.8e-267 924.1 579 77.2
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 9.9e-267 923.3 572 80.2
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 6.4e-266 920.6 603 74.6
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 8.4e-266 920.2 566 78.8
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 1.1e-265 919.8 599 77.3
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 1.1e-265 919.8 599 77.3
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 9.3e-265 916.8 591 76.8
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.1e-264 915.6 611 75.5
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 3.5e-264 914.8 591 76.6
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 4.6e-264 914.4 591 76.6
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 4.6e-264 914.4 585 76.8
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 6.0e-264 914.1 591 76.5
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 7.9e-264 913.7 653 71.4
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 1.9e-262 909.1 586 76.3
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 1.3e-261 906.4 578 76.3
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 1.3e-261 906.4 581 75.6
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 6.2e-261 904.0 577 75.9
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 3.1e-260 901.7 577 75.7
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 4.0e-260 901.4 566 77.2
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 5.3e-260 901.0 592 74.3
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 9.0e-260 900.2 568 76.6
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 1.5e-259 899.4 653 71.2
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 1.5e-259 899.4 568 76.6
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 3.4e-259 898.3 610 75.1
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 3.4e-259 898.3 577 75.9
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 2.2e-258 895.6 587 75.3
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 3.8e-258 894.8 580 76.6
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 2.5e-257 892.1 591 73.9
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 2.3e-255 885.6 573 76.1
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 1.9e-254 882.5 704 66.8
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 2.5e-254 882.1 581 75.6
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 8.2e-253 877.1 593 72.8
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 8.2e-253 877.1 579 74.4
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.8e-252 875.9 542 79.0
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 6.9e-252 874.0 588 73.8
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 9.0e-252 873.6 628 72.5
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 4.5e-251 871.3 591 73.1
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 2.2e-250 869.0 485 90.1
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 6.5e-250 867.5 552 76.6
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 5.5e-249 864.4 595 71.4
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 4.3e-246 854.7 578 72.1
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 7.4e-246 854.0 600 73.0
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 4.8e-245 851.3 599 72.1
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 1.8e-244 849.4 599 72.0
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 6.9e-244 847.4 576 74.1
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 9.1e-244 847.0 675 63.9
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 1.2e-243 846.7 556 77.0
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 2.9e-242 842.0 585 72.3
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 4.2e-241 838.2 595 70.4
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 1.6e-240 836.3 604 68.9
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 4.2e-233 811.6 523 77.1
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 5.5e-233 811.2 468 86.3
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 9.7e-230 800.4 627 66.3
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 2.6e-227 792.3 569 66.4
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 1.2e-224 783.5 596 63.4
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 1.5e-222 776.5 506 75.3
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 2.8e-221 772.3 462 80.7
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 1.0e-218 763.8 462 78.1
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 1.9e-193 679.9 491 69.2
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 1.5e-190 670.2 440 74.3
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 1.1e-188 664.1 465 70.5
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 3.7e-181 639.0 399 75.7
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 6.0e-179 631.7 531 58.0
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 3.6e-176 622.5 605 58.7
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.2e-174 617.5 608 55.6
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 1.2e-150 537.7 459 58.6
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 9.9e-150 534.6 351 72.9
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.2e-147 527.7 606 50.5
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 1.8e-143 513.8 359 71.3
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 2.9e-133 479.9 288 79.9
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 2.4e-127 460.3 310 69.0
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 1.6e-115 421.0 560 42.1
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.0e-114 418.3 239 83.7
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 5.9e-110 402.5 265 73.6
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 8.0e-107 392.1 240 79.2
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 3.6e-99 366.7 243 72.4
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 2.8e-91 340.5 593 34.9
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 8.3e-72 275.8 219 64.8
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.1e-66 258.8 173 71.7
Lj9A687T77 Lonicera japonica HOM05D000306 ORTHO05D007657 1.4e-58 231.9 142 80.3
arahy.Tifrunner.gnm1.ann1.ID2I7H Arachis hypogaea HOM05D000306 ORTHO05D007657 3.5e-54 217.2 128 83.6
HanXRQChr09g0255811 Helianthus annuus HOM05D000306 ORTHO05D007657 5.4e-47 193.4 125 76.8
SEGI_25583 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 1.0e-45 189.1 134 69.4
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 9.6e-44 182.6 189 56.6
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 2.6e-41 174.5 87 88.5
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 6.4e-40 169.9 557 27.3
Aqoxy3G01525 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.6e-38 165.2 88 84.1
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 2.8e-35 154.5 556 25.9
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 7.6e-33 146.4 104 64.4
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 1.1e-28 132.5 534 27.7
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.3e-24 119.0 64 81.2
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 9.3e-23 112.8 69 78.3
DCAR_020114 Daucus carota HOM05D000306 ORTHO05D007657 5.7e-20 103.6 109 56.9
CAN.G790.37 Capsicum annuum HOM05D000306 ORTHO05D007657 4.5e-17 94.0 55 78.2
RcHm_v2.0_Chr4g0405021 Rosa chinensis HOM05D000306 ORTHO05D030075 1.3e-16 92.4 59 78.0
arahy.Tifrunner.gnm1.ann1.QZT5UT Arachis hypogaea HOM05D000200 ORTHO05D010534 3.2e-15 87.8 50 86.0
MD07G1169000 Malus domestica HOM05D000306 ORTHO05D030075 3.6e-14 84.3 56 80.4
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 4.6e-14 84.0 82 56.1
TPR.G18960 Trifolium pratense HOM05D000306 ORTHO05D007657 3.9e-13 80.9 52 78.8
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 1.5e-12 79.0 82 54.9
TPR.G20440 Trifolium pratense HOM05D000306 ORTHO05D050985 4.3e-12 77.4 41 90.2
SMO271G0060 Selaginella moellendorffii HOM05D003206 ORTHO05D005207 4.5e-09 67.4 558 20.8
Aqoxy7G03604 Aquilegia oxysepala HOM05D003206 ORTHO05D005207 1.7e-08 65.5 537 21.0
SEGI_29302 Sequoiadendron giganteum HOM05D000306 ORTHO05D050985 3.8e-08 64.3 41 70.7
ClCG09G003080 Citrullus lanatus HOM05D003206 ORTHO05D005207 1.1e-07 62.8 539 20.8
Lalb_Chr04g0262301 Lupinus albus HOM05D003206 ORTHO05D005207 1.9e-07 62.0 528 21.2
Phvul.010G157400 Phaseolus vulgaris HOM05D003206 ORTHO05D005207 2.5e-07 61.6 567 21.0
QL02p097186 Quercus lobata HOM05D000306 ORTHO05D030075 2.5e-07 61.6 42 71.4
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 4.2e-07 60.8 66 54.5
SEGI_06294 Sequoiadendron giganteum HOM05D003206 ORTHO05D005207 4.2e-07 60.8 540 21.5
HanXRQChr02g0034821 Helianthus annuus HOM05D003206 ORTHO05D005207 5.5e-07 60.5 536 22.0
Pp3c5_10000 Physcomitrium patens HOM05D003206 ORTHO05D005207 5.5e-07 60.5 532 19.9
MELO3C023442.2 Cucumis melo HOM05D003206 ORTHO05D005207 7.2e-07 60.1 537 20.5
PSO017G7051 Papaver somniferum HOM05D003206 ORTHO05D005207 1.6e-06 58.9 537 19.9
PSO170G1430 Papaver somniferum HOM05D003206 ORTHO05D005207 6.1e-06 57.0 537 19.7


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