Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 3.4e-161 571.6 289 100.0
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.0e-101 374.0 295 66.4
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 3.7e-99 365.5 285 68.8
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.8e-98 363.2 285 67.7
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 6.9e-98 361.3 285 68.1
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 5.5e-95 351.7 288 64.2
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 7.4e-92 341.3 287 65.5
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 9.7e-92 340.9 270 67.0
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 6.5e-88 328.2 231 71.4
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 1.4e-87 327.0 269 63.6
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 9.4e-87 324.3 201 77.6
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 1.2e-86 323.9 284 62.0
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.6e-86 323.6 283 62.2
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 6.1e-86 321.6 230 71.3
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.8e-85 320.1 262 65.3
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 2.3e-85 319.7 201 77.6
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.1e-85 318.5 228 70.2
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 6.7e-85 318.2 228 68.9
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 8.8e-85 317.8 204 76.0
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.8e-85 317.8 228 70.2
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 1.5e-84 317.0 232 69.4
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 4.3e-84 315.5 250 64.4
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.7e-84 314.3 228 69.3
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 9.7e-84 314.3 250 65.2
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.3e-83 313.9 201 76.6
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 2.2e-83 313.2 201 76.1
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 2.2e-83 313.2 250 65.2
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 2.2e-83 313.2 250 67.2
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.8e-83 312.8 204 75.0
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 3.7e-83 312.4 250 63.2
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.8e-83 312.0 268 61.9
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.1e-82 310.8 199 74.9
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.8e-82 310.1 227 67.8
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.4e-82 309.7 204 74.0
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 2.0e-81 306.6 199 74.9
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 3.4e-81 305.8 278 59.0
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 3.4e-81 305.8 199 73.4
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 3.4e-81 305.8 257 60.7
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 5.9e-81 305.1 245 63.3
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.0e-80 304.3 204 73.0
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 2.2e-80 303.1 199 72.9
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.2e-80 303.1 277 59.2
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.9e-80 302.8 239 64.0
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.9e-80 302.8 225 68.0
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.9e-80 302.8 225 68.0
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 2.9e-80 302.8 243 64.2
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 5.0e-80 302.0 269 61.7
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 8.5e-80 301.2 201 72.6
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 8.5e-80 301.2 199 73.4
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.1e-79 300.8 204 71.6
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.4e-79 300.4 202 73.3
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 3.2e-79 299.3 268 58.6
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 4.2e-79 298.9 274 57.3
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 4.2e-79 298.9 265 58.1
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 5.5e-79 298.5 236 64.0
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 7.2e-79 298.1 265 58.5
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 2.1e-78 296.6 212 67.0
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 3.6e-78 295.8 201 69.7
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 7.9e-78 294.7 199 70.9
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.0e-77 294.3 204 68.6
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.0e-77 294.3 204 68.6
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.8e-77 293.5 199 69.8
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 2.3e-77 293.1 204 68.1
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 2.3e-77 293.1 204 68.1
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.0e-77 292.7 199 68.8
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 3.0e-77 292.7 204 68.1
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 3.0e-77 292.7 227 66.5
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 5.1e-77 292.0 199 69.8
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 8.8e-77 291.2 204 67.6
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 1.1e-76 290.8 204 67.6
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 2.0e-76 290.0 204 68.6
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 2.6e-76 289.7 197 70.6
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 3.3e-76 289.3 199 68.3
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 7.4e-76 288.1 201 67.7
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 7.4e-76 288.1 199 68.3
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 2.2e-75 286.6 180 78.3
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 2.8e-75 286.2 202 68.3
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 8.2e-75 284.6 266 58.6
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.1e-74 284.3 199 67.8
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 7.0e-74 281.6 202 65.8
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 1.0e-72 277.7 210 63.8
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 6.5e-72 275.0 280 57.1
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.4e-71 273.9 261 57.5
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 4.2e-71 272.3 202 67.8
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 5.5e-71 271.9 200 69.5
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 7.4e-68 261.5 226 57.1
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 9.7e-68 261.2 197 63.5
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.3e-67 260.8 217 59.0
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.8e-67 259.6 213 61.0
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 3.1e-66 256.1 203 63.5
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 1.6e-65 253.8 205 62.0
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.5e-63 247.3 182 65.9
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.5e-60 237.3 172 66.3
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 1.1e-58 231.1 223 57.4
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 7.0e-58 228.4 261 49.8
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.7e-51 207.2 139 73.4
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.3e-51 204.9 220 52.7
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.2e-49 201.1 139 66.9
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 1.6e-49 200.7 264 45.1
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 2.3e-40 170.2 197 43.7
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 5.6e-39 165.6 151 57.6
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 9.8e-36 154.8 204 39.7
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 2.3e-32 143.7 97 72.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.9e-32 142.9 92 75.0
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 2.8e-30 136.7 178 46.6
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 2.3e-29 133.7 176 47.2
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.9e-27 126.7 81 75.3
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 1.4e-26 124.4 99 63.6
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 1.4e-26 124.4 236 33.1
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 3.0e-24 116.7 93 60.2
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 1.1e-21 108.2 77 68.8
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 3.5e-17 93.2 70 68.6
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.1e-15 88.2 176 37.5
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 3.3e-15 86.7 67 61.2
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 2.1e-14 84.0 58 69.0
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.1e-14 84.0 57 68.4
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 4.0e-13 79.7 45 77.8
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 3.4e-12 76.6 58 63.8
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.1e-07 61.6 41 70.7
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 1.6e-06 57.8 99 36.4


User provided reference genes

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