Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 5.1e-82 307.8 162 100.0
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 2.5e-36 156.0 163 58.9
Glyma.02G043800 Glycine max HOM05D003173 ORTHO05D003546 3.0e-34 149.1 167 56.9
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 1.4e-31 140.2 161 55.3
Lalb_Chr05g0229691 Lupinus albus HOM05D003173 ORTHO05D003546 1.6e-30 136.7 179 51.4
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 4.5e-30 135.2 179 49.7
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 5.0e-29 131.7 170 56.5
Glyma.11G081300 Glycine max HOM05D003173 ORTHO05D003546 5.5e-28 128.3 162 53.7
VMungo0251G0852 Vigna mungo HOM05D003173 ORTHO05D003546 1.3e-24 117.1 172 45.3
Phvul.003G267350 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.7e-24 116.7 171 45.0
Ca_24945_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 8.2e-24 114.4 163 49.1
Lj2g0017226 Lotus japonicus HOM05D003173 ORTHO05D003546 5.3e-23 111.7 181 48.6
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 2.0e-22 109.8 169 49.7
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 1.7e-21 106.7 172 48.8
VMungo1215G2410 Vigna mungo HOM05D003173 ORTHO05D003546 1.6e-19 100.1 170 45.9
Medtr5g023030 Medicago truncatula HOM05D003173 ORTHO05D003546 4.0e-18 95.5 162 43.2
Phvul.002G104300 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.5e-17 93.6 162 46.3
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.1e-15 85.5 173 40.5
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 7.0e-15 84.7 175 38.3
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 5.9e-14 81.6 159 40.9
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 2.9e-13 79.3 163 37.4
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 3.8e-13 79.0 176 36.9
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 5.0e-13 78.6 156 37.8
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 6.5e-13 78.2 172 37.2
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 6.5e-13 78.2 176 40.3
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 1.1e-12 77.4 175 36.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.5e-12 76.3 173 37.0
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 4.2e-12 75.5 174 35.1
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 5.5e-12 75.1 169 36.7
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.6e-11 73.6 196 37.2
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.1e-11 73.2 165 37.0
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 2.1e-11 73.2 185 35.7
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.1e-11 73.2 176 40.3
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 2.1e-11 73.2 176 35.2
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.7e-11 72.8 184 35.3
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 4.7e-11 72.0 152 35.5
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.7e-11 72.0 176 39.8
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 4.7e-11 72.0 176 39.8
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 6.1e-11 71.6 159 36.5
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.0e-10 70.9 163 37.4
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.4e-10 70.5 157 35.7
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.8e-10 70.1 163 39.3
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.8e-10 70.1 157 37.6
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 3.0e-10 69.3 184 34.8
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.0e-10 69.3 172 35.5
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.0e-10 69.3 180 35.0
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 4.0e-10 68.9 171 35.7
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.8e-10 68.2 172 35.5
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 6.8e-10 68.2 158 37.3
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 8.8e-10 67.8 178 34.8
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 1.2e-09 67.4 199 32.2
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 1.2e-09 67.4 157 35.7
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.5e-09 67.0 185 34.6
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.5e-09 67.0 157 35.7
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.5e-09 67.0 172 34.9
Haze_03701 Corylus avellana HOM05D003173 ORTHO05D003546 2.6e-09 66.2 94 46.8
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 2.6e-09 66.2 160 35.0
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 2.6e-09 66.2 166 35.5
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.6e-09 66.2 155 36.8
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 3.4e-09 65.9 187 34.8
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 3.4e-09 65.9 154 39.6
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 4.4e-09 65.5 170 35.9
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 1.3e-08 63.9 179 35.2
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.7e-08 63.5 170 35.3
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 1.7e-08 63.5 164 32.3
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 1.7e-08 63.5 185 34.1
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 1.7e-08 63.5 160 35.6
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 2.8e-08 62.8 168 32.7
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 3.7e-08 62.4 171 36.8
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 4.9e-08 62.0 168 38.7
FAN19G2722 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.3e-08 61.6 182 32.4
Manes.02G110500 Manihot esculenta HOM05D003173 ORTHO05D003546 6.3e-08 61.6 163 35.0
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 8.3e-08 61.2 168 31.5
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 8.3e-08 61.2 182 32.4
Ciclev10027470m.g Citrus clementina HOM05D003173 ORTHO05D003546 1.1e-07 60.8 178 32.0
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.4e-07 60.5 178 34.3
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 1.4e-07 60.5 182 33.5
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.4e-07 60.5 187 34.2
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 1.4e-07 60.5 176 31.8
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 2.4e-07 59.7 168 35.1
FAN28G2348 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.4e-07 59.7 181 32.0
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 2.4e-07 59.7 179 31.3
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 3.1e-07 59.3 159 38.4
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 4.1e-07 58.9 192 30.7
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 4.1e-07 58.9 193 33.7
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 5.4e-07 58.5 182 30.2
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 7.0e-07 58.2 151 34.4
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 9.2e-07 57.8 177 29.9
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.6e-06 57.0 156 36.5
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 1.6e-06 57.0 164 34.1
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 2.0e-06 56.6 152 30.9
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.0e-06 56.6 174 33.3
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 3.5e-06 55.8 181 31.5
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 4.5e-06 55.5 191 29.8
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 5.9e-06 55.1 172 32.0
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 5.9e-06 55.1 172 33.7
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 5.9e-06 55.1 172 33.1
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 5.9e-06 55.1 144 29.9
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 7.7e-06 54.7 156 31.4
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 7.7e-06 54.7 183 32.8
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 7.7e-06 54.7 159 37.7
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 7.7e-06 54.7 165 32.7
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 7.7e-06 54.7 153 34.0


User provided reference genes

Program Settings