Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P899T22 Lonicera japonica HOM05D008126 ORTHO05D000309 2.5e-77 292.0 142 100.0
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-68 260.8 142 91.5
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-67 257.7 142 90.1
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 5.8e-66 254.2 141 86.5
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-66 253.8 142 88.7
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-65 252.7 130 95.4
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-64 247.7 142 88.0
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-63 245.7 141 85.1
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-63 244.6 141 84.4
Lj5P369T29 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-62 242.7 141 85.1
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-62 241.1 139 84.2
Lj5P17T12 Lonicera japonica HOM05D008126 ORTHO05D000309 3.3e-61 238.4 133 87.2
Lj9P530T13 Lonicera japonica HOM05D008126 ORTHO05D000309 7.4e-61 237.3 142 81.7
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-56 223.0 138 76.8
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-55 219.9 138 76.1
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-55 218.8 139 75.5
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-54 216.1 139 74.8
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 7.4e-53 210.7 138 73.9
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-51 206.1 110 89.1
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-50 203.0 140 72.1
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-48 196.8 140 70.0
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-48 196.8 138 65.9
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-48 196.8 138 65.2
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-48 195.3 138 64.5
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-48 194.9 106 85.8
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-44 183.3 113 77.0
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-44 183.0 115 75.7
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-43 177.6 133 63.2
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-41 173.7 142 59.9
Lj2P661T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-41 173.3 133 60.2
Lj2P1035T33 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-41 172.9 96 84.4
Lj2P438T31 Lonicera japonica HOM05D008126 ORTHO05D000309 3.8e-41 171.8 134 63.4
Lj1P1225T25 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-40 170.2 137 57.7
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-40 170.2 142 57.7
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-40 168.3 136 58.8
Lj1P842T49 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-40 168.3 100 78.0
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-38 161.0 133 56.4
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-35 152.5 94 73.4
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-35 152.5 133 54.1
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-35 152.5 133 57.1
Lj3P1030T42 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-34 150.2 132 58.3
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-33 146.7 122 55.7
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-33 146.0 138 52.2
Lj9P461T43 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-33 144.4 140 52.1
Lj9P465T64 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-30 136.0 108 59.3
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-30 134.4 78 74.4
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-27 125.2 79 70.9
Lj3P956T21 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-26 123.6 80 78.8
Lj7P342T47 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-24 116.3 105 54.3
Lj8P617T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-24 116.3 85 61.2
Lj1P817T17 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-23 113.6 78 61.5
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 4.7e-23 111.7 143 44.8
Lj6P361T6 Lonicera japonica HOM05D008126 ORTHO05D000309 8.0e-23 110.9 89 55.1
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 6.8e-22 107.8 99 52.5
Lj4P611T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-20 102.1 103 47.6
Lj1P1015T13 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-16 89.7 79 57.0
Lj2P359T36 Lonicera japonica HOM05D008126 ORTHO05D000309 9.5e-16 87.4 79 49.4
Lj5P258T10 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-15 87.0 74 52.7
Lju9295C0G2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.2e-11 70.9 71 47.9
Lj9P201T30 Lonicera japonica HOM05D008126 ORTHO05D000309 4.5e-10 68.6 86 48.8
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 8.6e-09 64.3 39 59.0
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.5e-08 63.5 62 51.6
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-08 62.8 102 37.3
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 2.5e-08 62.8 39 56.4
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-08 62.8 70 48.6
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.5e-08 62.8 50 54.0
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-08 62.4 102 37.3
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-08 62.4 102 37.3
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-08 62.4 102 37.3
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 3.3e-08 62.4 53 54.7
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-08 62.0 102 36.3
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.3e-08 62.0 109 34.9
Peaxi162Scf00002g02917 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-08 62.0 53 52.8
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 4.3e-08 62.0 48 52.1
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-08 62.0 53 52.8
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 4.3e-08 62.0 48 52.1
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 5.6e-08 61.6 102 37.3
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 7.3e-08 61.2 114 31.6
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.3e-08 61.2 78 44.9
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 7.3e-08 61.2 62 48.4
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 9.5e-08 60.8 52 53.8
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-07 60.5 70 47.1
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 1.2e-07 60.5 128 32.8
EL10Ac5g11999 Beta vulgaris HOM05D008388 ORTHO05D000309 1.6e-07 60.1 109 32.1
EL10Ac9g22677 Beta vulgaris HOM05D008388 ORTHO05D000309 1.6e-07 60.1 109 32.1
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-07 60.1 102 36.3
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-07 60.1 64 40.6
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-07 59.7 86 38.4
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 2.1e-07 59.7 80 37.5
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 2.1e-07 59.7 53 52.8
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.6e-07 58.9 65 43.1
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 3.6e-07 58.9 65 40.0
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-07 58.5 105 30.5
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.7e-07 58.5 114 29.8
Nitab4.5_0000101g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.7e-07 58.5 71 35.2
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 4.7e-07 58.5 53 50.9
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 4.7e-07 58.5 53 50.9
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 6.1e-07 58.2 40 57.5
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 1.4e-06 57.0 42 54.8
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 1.4e-06 57.0 57 49.1
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-06 57.0 66 37.9
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-06 56.6 98 28.6
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 2.3e-06 56.2 74 37.8
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-06 56.2 123 32.5
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 2.3e-06 56.2 122 27.0
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 2.3e-06 56.2 57 49.1
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 2.3e-06 56.2 53 49.1
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-06 55.8 84 35.7
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.0e-06 55.8 51 49.0
HanXRQChr04g0101711 Helianthus annuus HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 53.3
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 53 49.1
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 3.0e-06 55.8 68 39.7
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-06 55.5 84 29.8
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-06 55.5 57 49.1
Solyc03g083735.1 Solanum lycopersicum HOM05D008126 ORTHO05D000309 4.0e-06 55.5 43 51.2
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.0e-06 55.5 40 50.0
DCAR_029798 Daucus carota HOM05D001383 ORTHO05D000309 5.2e-06 55.1 112 31.2
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.2e-06 55.1 51 49.0
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.2e-06 55.1 55 49.1
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.2e-06 55.1 113 29.2
Peaxi162Scf00006g00328 Petunia axillaris HOM05D001383 ORTHO05D000309 5.2e-06 55.1 37 62.2
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 5.2e-06 55.1 85 32.9
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 5.2e-06 55.1 132 33.3
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 6.8e-06 54.7 73 35.6
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 6.8e-06 54.7 98 32.7
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.8e-06 54.7 51 47.1
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.8e-06 54.7 39 53.8
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.8e-06 54.7 39 53.8
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 6.8e-06 54.7 82 31.7
Nitab4.5_0000147g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.8e-06 54.7 44 47.7
Nitab4.5_0000923g0160 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.8e-06 54.7 49 44.9
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 6.8e-06 54.7 40 57.5
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 6.8e-06 54.7 40 52.5
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 8.9e-06 54.3 41 53.7
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 8.9e-06 54.3 98 31.6
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 8.9e-06 54.3 102 33.3
Gohir.A09G200200 Gossypium hirsutum HOM05D001383 ORTHO05D000309 8.9e-06 54.3 59 42.4
Nitab4.5_0000129g0270 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 45 46.7
Nitab4.5_0000463g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 68 38.2
Nitab4.5_0000792g0240 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 49 44.9
Nitab4.5_0001117g0080 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 46 45.7
Nitab4.5_0003726g0110 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 53 43.4
Nitab4.5_0006239g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 55 41.8
Solyc01g060183.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 43 51.2
Solyc03g094173.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 43 51.2


User provided reference genes

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