Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P890T11 Lonicera japonica HOM05D008338 ORTHO05D000921 6.8e-60 233.8 118 100.0
Lj4P771T23 Lonicera japonica HOM05D008338 ORTHO05D000921 7.8e-48 193.7 117 84.6
Lj1A366G18 Lonicera japonica HOM05D008338 ORTHO05D000921 8.6e-47 190.3 117 83.8
Lj2A483T24 Lonicera japonica HOM05D008338 ORTHO05D000921 7.3e-46 187.2 117 82.1
Lju1319C4G9 Lonicera japonica HOM05D008338 ORTHO05D000921 7.3e-46 187.2 117 82.9
Lj7A99T40 Lonicera japonica HOM05D008338 ORTHO05D000921 6.2e-45 184.1 117 77.8
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-44 183.3 117 80.3
Lj4A312T9 Lonicera japonica HOM05D008338 ORTHO05D000921 3.1e-44 181.8 117 80.3
Lj9A689T48 Lonicera japonica HOM05D008338 ORTHO05D000921 3.1e-44 181.8 117 77.8
Lj5A436T25 Lonicera japonica HOM05D008338 ORTHO05D000921 6.8e-44 180.6 109 82.6
Lj4C727T6 Lonicera japonica HOM05D008338 ORTHO05D000921 8.9e-44 180.3 117 75.2
Lju1040A2T29 Lonicera japonica HOM05D008338 ORTHO05D000921 1.5e-43 179.5 117 75.2
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 1.9e-41 172.6 117 71.8
Lj7A576T77 Lonicera japonica HOM05D008338 ORTHO05D000921 4.1e-41 171.4 117 71.8
Lj1P813T6 Lonicera japonica HOM05D008338 ORTHO05D000921 1.6e-40 169.5 103 81.6
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 2.7e-40 168.7 117 70.1
Lj2C925G1 Lonicera japonica HOM05D008338 ORTHO05D000921 4.7e-29 131.3 102 67.6
Lj9P576T20 Lonicera japonica HOM05D008338 ORTHO05D000921 2.0e-27 125.9 97 63.9
Lj2P1171T5 Lonicera japonica HOM05D008338 ORTHO05D000921 4.4e-27 124.8 84 75.0
Lj2P419T27 Lonicera japonica HOM05D008338 ORTHO05D000921 5.4e-25 117.9 84 72.6
Lj8P612T5 Lonicera japonica HOM05D008338 ORTHO05D000921 1.3e-23 113.2 87 64.4
Lj8A133T59 Lonicera japonica HOM05D008338 ORTHO05D000921 1.8e-12 76.3 49 67.3
Lj7A613T70 Lonicera japonica HOM05D008338 ORTHO05D000921 3.4e-11 72.0 46 71.7
Lj7A78G56 Lonicera japonica HOM05D008338 ORTHO05D000921 4.5e-11 71.6 46 69.6
Psat7g176640 Pisum sativum HOM05D000665 ORTHO05D000921 2.2e-10 69.3 110 38.2
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.2e-10 69.3 107 40.2
Ciclev10033776m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.8e-10 68.6 103 37.9
Psat5g151680 Pisum sativum HOM05D000665 ORTHO05D000921 6.4e-10 67.8 109 37.6
Psat7g015480 Pisum sativum HOM05D000665 ORTHO05D000921 6.4e-10 67.8 110 37.3
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 8.4e-10 67.4 105 36.2
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 1.1e-09 67.0 113 31.9
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.4e-09 66.6 113 31.9
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 1.4e-09 66.6 113 31.9
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.4e-09 66.6 103 36.9
Lj5A412T16 Lonicera japonica HOM05D008338 ORTHO05D000921 1.4e-09 66.6 40 75.0
Psat0s94g0040 Pisum sativum HOM05D000665 ORTHO05D000921 2.4e-09 65.9 114 36.8
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 9.3e-09 63.9 112 31.2
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 9.3e-09 63.9 112 31.2
Lj2A609T18 Lonicera japonica HOM05D008338 ORTHO05D000921 9.3e-09 63.9 46 65.2
CSS0007077 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.2e-08 63.5 100 35.0
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.6e-08 63.2 103 35.0
Dinv09638 Davidia involucrata HOM05D008473 ORTHO05D000921 1.6e-08 63.2 105 36.2
Psat7g003000 Pisum sativum HOM05D000665 ORTHO05D000921 1.6e-08 63.2 109 34.9
Medtr3g065345 Medicago truncatula HOM05D008338 ORTHO05D000921 2.7e-08 62.4 63 47.6
TPR.G10504 Trifolium pratense HOM05D000665 ORTHO05D000921 2.7e-08 62.4 102 37.3
Psat5g276600 Pisum sativum HOM05D003171 ORTHO05D000921 4.6e-08 61.6 62 48.4
Lj2A728G9 Lonicera japonica HOM05D008338 ORTHO05D000921 6.0e-08 61.2 46 58.7
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 7.9e-08 60.8 120 34.2
CSS0049933 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.3e-07 60.1 107 30.8
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 1.3e-07 60.1 111 35.1
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.3e-07 60.1 117 30.8
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 1.8e-07 59.7 112 29.5
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.3e-07 59.3 110 27.3
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 3.0e-07 58.9 111 33.3
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 3.9e-07 58.5 106 34.0
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 5.1e-07 58.2 105 35.2
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 5.1e-07 58.2 74 36.5
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 8.7e-07 57.4 111 32.4
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 8.7e-07 57.4 111 32.4
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 8.7e-07 57.4 111 32.4
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.1e-06 57.0 105 34.3
Dinv12070 Davidia involucrata HOM05D008473 ORTHO05D000921 1.1e-06 57.0 99 31.3
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.1e-06 57.0 117 30.8
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 1.5e-06 56.6 117 29.1
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-06 56.6 111 32.4
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.9e-06 56.2 102 28.4
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 1.9e-06 56.2 111 32.4
Ciclev10017745m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.5e-06 55.8 103 32.0
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-06 55.8 106 33.0
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 3.3e-06 55.5 105 29.5
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 3.3e-06 55.5 106 30.2
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 3.3e-06 55.5 100 36.0
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 3.3e-06 55.5 95 37.9
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 4.3e-06 55.1 111 31.5
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 5.6e-06 54.7 110 32.7
Haze_19866 Corylus avellana HOM05D001129 ORTHO05D022266 7.4e-06 54.3 96 34.4
Rhsim05G0204000 Rhododendron simsii HOM05D007209 ORTHO05D000921 7.4e-06 54.3 106 31.1
Rhsim12G0033100 Rhododendron simsii HOM05D007209 ORTHO05D000921 7.4e-06 54.3 106 31.1


User provided reference genes

Program Settings