Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.8e-154 549.3 288 100.0
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 9.1e-50 201.4 285 50.5
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.0e-48 195.7 282 51.1
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.1e-47 194.5 282 51.1
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 2.4e-42 176.8 283 47.7
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.7e-40 170.6 283 45.9
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 1.5e-39 167.5 294 46.6
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 2.1e-38 163.7 286 45.5
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 8.0e-38 161.8 198 53.5
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.0e-37 161.4 280 45.7
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 4.0e-37 159.5 287 48.4
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 5.2e-37 159.1 299 43.5
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 8.8e-37 158.3 295 44.4
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 2.6e-36 156.8 290 45.9
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 7.5e-36 155.2 255 46.3
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 3.7e-35 152.9 282 45.7
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.9e-35 152.5 296 43.6
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.1e-34 151.4 208 51.4
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.1e-34 151.4 301 45.2
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.4e-34 150.2 281 44.5
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 3.1e-34 149.8 278 45.0
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 4.1e-34 149.4 301 43.2
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 2.3e-32 143.7 301 41.5
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.9e-31 140.6 279 42.7
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 4.3e-31 139.4 288 40.6
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 3.6e-30 136.3 294 41.2
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 8.0e-30 135.2 282 42.6
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.0e-29 134.8 304 43.4
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-29 134.4 297 41.1
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.4e-29 134.4 303 40.6
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 8.9e-29 131.7 292 44.2
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 9.8e-28 128.3 294 40.5
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 2.9e-27 126.7 307 37.8
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 2.9e-27 126.7 282 40.1
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 4.9e-27 125.9 273 39.2
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 1.1e-26 124.8 306 42.2
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-26 124.4 275 40.7
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 1.4e-26 124.4 298 39.9
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 7.0e-26 122.1 260 39.2
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.2e-25 121.3 296 39.5
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.6e-25 120.9 271 40.2
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.6e-25 120.9 242 40.5
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.0e-25 120.6 298 38.3
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.0e-25 120.6 280 38.6
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 2.0e-25 120.6 286 40.2
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.9e-24 116.3 299 40.1
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 8.6e-24 115.2 281 39.9
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 3.6e-22 109.8 270 37.4
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-21 107.8 286 38.1
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 3.1e-21 106.7 195 43.1
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 6.8e-21 105.5 285 37.2
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.2e-20 104.8 296 36.1
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.2e-19 100.5 250 36.0
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 1.1e-18 98.2 310 34.2
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 3.2e-18 96.7 243 39.5
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 5.4e-18 95.9 282 35.5
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 7.0e-18 95.5 284 36.3
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 7.0e-18 95.5 298 35.2
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 7.0e-18 95.5 275 38.2
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.2e-17 94.7 284 36.3
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.0e-17 94.0 282 35.1
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 2.0e-17 94.0 243 35.8
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 7.8e-17 92.0 279 34.8
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.3e-16 91.3 237 38.0
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 1.9e-15 87.4 260 35.4
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 1.1e-13 81.6 289 34.6
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 1.8e-13 80.9 128 47.7
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 1.2e-12 78.2 283 31.8
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.5e-12 77.8 297 33.3
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.5e-12 77.8 223 36.3
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.7e-11 74.3 168 44.0
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 1.7e-11 74.3 280 33.2
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 4.9e-11 72.8 56 71.4
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 1.1e-10 71.6 226 34.1
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 4.1e-10 69.7 203 33.5
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 1.6e-09 67.8 135 44.4
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 3.5e-09 66.6 273 30.4
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 4.6e-09 66.2 135 43.0
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 1.7e-08 64.3 56 58.9
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 5.1e-08 62.8 62 59.7
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 5.1e-08 62.8 179 33.5
HanXRQChr13g0387161 Helianthus annuus HOM05D007731 ORTHO05D008483 2.5e-07 60.5 210 32.4
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 5.6e-07 59.3 154 33.1
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 7.3e-07 58.9 61 52.5
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 1.2e-06 58.2 56 57.1
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.6e-06 57.8 56 57.1
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.1e-06 57.4 61 49.2
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 2.1e-06 57.4 220 30.0
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 2.8e-06 57.0 56 55.4
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 2.8e-06 57.0 54 53.7
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 6.2e-06 55.8 56 55.4
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 6.2e-06 55.8 56 55.4
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 6.2e-06 55.8 56 55.4
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 6.2e-06 55.8 56 55.4
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 6.2e-06 55.8 56 51.8
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 6.2e-06 55.8 56 51.8


User provided reference genes

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