Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 0.0e+00 1123.2 563 100.0
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 7.1e-224 780.8 604 67.2
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 3.0e-222 775.4 610 66.1
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 6.4e-217 757.7 597 64.3
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.1e-216 756.9 582 66.5
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.4e-216 756.5 604 64.4
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 2.5e-216 755.7 602 64.8
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 3.2e-216 755.4 602 64.6
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 1.2e-215 753.4 569 66.8
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 7.9e-215 750.7 604 64.1
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 5.6e-213 744.6 527 70.0
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 6.2e-212 741.1 589 64.2
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 1.8e-211 739.6 589 64.0
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 4.0e-211 738.4 586 65.0
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 9.0e-211 737.3 588 65.0
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 2.0e-210 736.1 596 62.9
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 2.0e-210 736.1 532 68.6
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 2.0e-210 736.1 595 63.9
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 4.5e-210 734.9 605 62.5
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 4.5e-210 734.9 586 64.8
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 1.7e-209 733.0 592 64.4
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 1.1e-208 730.3 587 63.5
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 1.4e-208 729.9 600 63.2
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 4.6e-207 724.9 594 64.1
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 1.8e-206 723.0 598 60.5
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 2.3e-206 722.6 589 64.3
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 3.9e-206 721.8 595 61.2
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 1.5e-205 719.9 600 63.0
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 1.5e-205 719.9 599 63.1
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 1.5e-205 719.9 592 63.2
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 5.7e-205 718.0 587 62.7
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 7.4e-205 717.6 601 63.2
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.6e-204 716.5 611 60.6
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 2.2e-204 716.1 598 61.7
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.2e-204 716.1 579 64.2
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 2.2e-204 716.1 579 64.4
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 2.8e-204 715.7 597 60.6
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 2.8e-204 715.7 597 60.6
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 6.3e-204 714.5 591 61.4
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 8.2e-204 714.1 596 61.1
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 8.2e-204 714.1 599 61.9
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.1e-203 713.8 634 59.5
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.4e-203 713.4 579 64.4
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.4e-203 713.4 587 62.7
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 3.1e-203 712.2 590 62.0
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 4.1e-203 711.8 633 59.1
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 5.3e-203 711.4 592 62.0
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 9.0e-203 710.7 595 60.7
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.2e-202 710.3 598 61.4
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 4.5e-202 708.4 595 61.2
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 1.3e-201 706.8 594 62.1
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 2.2e-201 706.1 594 61.1
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.8e-201 705.3 655 57.7
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 6.5e-201 704.5 600 61.3
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 6.5e-201 704.5 591 62.4
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 1.4e-200 703.4 591 61.1
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.5e-200 702.6 524 68.5
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 7.2e-200 701.0 597 61.0
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 2.7e-199 699.1 591 62.1
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 4.6e-199 698.4 595 60.3
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 2.3e-198 696.0 573 61.6
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 3.0e-198 695.7 593 60.7
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 1.5e-197 693.3 597 59.6
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 2.0e-197 693.0 534 65.4
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 1.7e-196 689.9 598 60.5
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 4.8e-196 688.3 524 65.5
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 8.2e-196 687.6 591 59.9
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 1.1e-195 687.2 602 59.3
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 1.4e-195 686.8 613 58.9
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 1.2e-194 683.7 591 60.2
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 3.4e-194 682.2 534 64.6
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 5.0e-193 678.3 544 64.0
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.5e-189 666.8 575 62.3
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 9.7e-189 664.1 504 67.9
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 4.5e-186 655.2 549 62.7
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 2.2e-185 652.9 602 58.3
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 3.8e-185 652.1 524 63.5
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 8.5e-185 651.0 567 57.8
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 1.9e-184 649.8 610 57.7
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.9e-184 649.8 597 57.1
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 8.0e-183 644.4 568 58.3
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.4e-182 643.7 577 58.2
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 1.8e-182 643.3 565 58.9
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.1e-181 640.6 565 58.9
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 4.4e-181 638.6 612 54.4
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 4.8e-180 635.2 529 61.8
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 6.3e-180 634.8 570 57.5
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.2e-178 630.6 562 57.8
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 3.8e-177 625.5 574 56.8
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.9e-176 623.2 573 56.9
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 3.2e-176 622.5 565 58.9
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 9.4e-176 620.9 574 56.6
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 2.7e-175 619.4 530 60.4
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 3.6e-175 619.0 596 55.5
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 6.1e-175 618.2 569 56.6
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 8.0e-175 617.8 569 57.1
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 8.0e-175 617.8 569 56.9
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 8.0e-175 617.8 530 60.4
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 1.2e-173 614.0 674 51.5
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 3.4e-173 612.5 523 61.2
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.2e-172 609.8 674 51.2
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.4e-171 607.1 444 69.6
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 1.8e-171 606.7 530 58.7
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 2.0e-170 603.2 560 55.4
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 2.7e-170 602.8 559 55.6
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 5.9e-170 601.7 566 56.5
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 1.0e-169 600.9 559 55.5
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 1.7e-169 600.1 573 55.0
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 1.1e-168 597.4 573 54.6
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 6.3e-164 581.6 576 54.5
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.5e-160 570.5 555 54.8
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 7.2e-160 568.2 579 53.5
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 3.0e-158 562.8 614 50.3
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.4e-157 559.3 603 51.2
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 9.2e-155 551.2 598 49.3
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 3.7e-148 529.3 566 50.4
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 4.3e-144 515.8 551 50.1
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 2.3e-142 510.0 515 52.6
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.6e-135 486.1 577 47.7
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 1.1e-120 438.0 602 45.5
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 1.4e-118 431.0 617 42.5
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 7.6e-117 425.2 613 41.8
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.2e-99 366.7 580 38.4
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 6.0e-98 362.5 267 66.3
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.8e-97 360.9 553 38.3
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.1e-96 358.2 553 38.2
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 6.5e-92 342.4 484 39.9
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 1.6e-90 337.8 314 56.4
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 5.1e-89 332.8 232 69.4
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 3.1e-86 323.6 410 44.1
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 2.1e-82 310.8 308 52.3
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 2.2e-79 300.8 216 66.7
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 1.9e-51 208.0 130 76.2
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 1.7e-47 194.9 244 45.5
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 1.2e-08 65.9 111 33.3
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 8.4e-07 59.7 122 32.0
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 1.1e-06 59.3 52 59.6


User provided reference genes

Program Settings