Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P759T24 Lonicera japonica HOM05D000081 ORTHO05D000036 2.6e-68 261.9 134 100.0
Lj8C184T7 Lonicera japonica HOM05D000081 ORTHO05D000036 1.5e-39 166.4 100 88.0
Dinv42531 Davidia involucrata HOM05D000081 ORTHO05D000036 2.8e-25 119.0 100 63.0
Dinv19637 Davidia involucrata HOM05D000081 ORTHO05D000036 3.1e-24 115.5 104 59.6
CSS0029789 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 9.8e-23 110.5 101 56.4
Gohir.A08G026100 Gossypium hirsutum HOM05D000081 ORTHO05D000036 2.5e-18 95.9 100 54.0
Gorai.004G034600 Gossypium raimondii HOM05D000081 ORTHO05D000036 3.3e-18 95.5 100 53.0
QL08p000375 Quercus lobata HOM05D000081 ORTHO05D000036 5.6e-18 94.7 122 50.8
Manes.01G007600 Manihot esculenta HOM05D000081 ORTHO05D000036 7.3e-18 94.4 115 49.6
Duzib213G0494 Durio zibethinus HOM05D000081 ORTHO05D000036 9.5e-18 94.0 101 54.5
Gohir.D08G036600 Gossypium hirsutum HOM05D000081 ORTHO05D000036 1.2e-17 93.6 100 52.0
Thecc.07G000700 Theobroma cacao HOM05D000081 ORTHO05D000036 1.6e-17 93.2 103 52.4
Nitab4.5_0000294g0180 Nicotiana tabacum HOM05D000081 ORTHO05D000036 8.1e-17 90.9 117 42.7
Ciclev10007904m.g Citrus clementina HOM05D000081 ORTHO05D000036 1.1e-16 90.5 128 46.9
Nitab4.5_0001732g0010 Nicotiana tabacum HOM05D000081 ORTHO05D000036 1.4e-16 90.1 120 42.5
COL.COLO4_07795 Corchorus olitorius HOM05D000081 ORTHO05D000036 3.1e-16 89.0 101 52.5
Sopen07g034400 Solanum pennellii HOM05D000081 ORTHO05D000036 3.1e-16 89.0 117 44.4
Haze_09922 Corylus avellana HOM05D000081 ORTHO05D000036 5.2e-16 88.2 107 50.5
Eucgr.F01981 Eucalyptus grandis HOM05D000081 ORTHO05D000036 5.2e-16 88.2 128 42.2
Peaxi162Scf00232g00810 Petunia axillaris HOM05D000081 ORTHO05D000036 5.2e-16 88.2 117 43.6
TWI38G0942 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 6.8e-16 87.8 103 52.4
Ca_14126_v3 Cicer arietinum L. HOM05D000081 ORTHO05D000036 8.9e-16 87.4 100 48.0
Duzib268G0222 Durio zibethinus HOM05D000081 ORTHO05D000036 8.9e-16 87.4 100 52.0
Cfa016968 Carpinus fangiana HOM05D000081 ORTHO05D000036 1.2e-15 87.0 122 46.7
TWI39G1194 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 1.2e-15 87.0 103 50.5
Solyc07g066220.3 Solanum lycopersicum HOM05D000081 ORTHO05D000036 2.0e-15 86.3 111 45.9
Manes.05G203900 Manihot esculenta HOM05D000081 ORTHO05D000036 4.4e-15 85.1 113 46.0
Lj1C902G5 Lonicera japonica HOM05D000081 ORTHO05D000036 7.6e-15 84.3 89 56.2
PGSC0003DMG400022143 Solanum tuberosum HOM05D000081 ORTHO05D000036 9.9e-15 84.0 111 45.0
CAN.G623.79 Capsicum annuum HOM05D000081 ORTHO05D000036 1.3e-14 83.6 100 48.0
Hma1.2p1_0193F.1_g084400 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 1.7e-14 83.2 101 51.5
Actinidia03588 Actinidia chinensis HOM05D000081 ORTHO05D000036 2.2e-14 82.8 100 50.0
Prupe.6G036300 Prunus persica HOM05D000081 ORTHO05D000036 2.2e-14 82.8 103 50.5
Cc05_g15790 Coffea canephora HOM05D000081 ORTHO05D000036 3.7e-14 82.0 101 51.5
Potri.011G169300 Populus trichocarpa HOM05D000081 ORTHO05D000036 4.9e-14 81.6 123 40.7
TAR627G0177 Trochodendron aralioides HOM05D000081 ORTHO05D000036 1.1e-13 80.5 123 44.7
Sabra11G0137500 Salix brachista HOM05D000081 ORTHO05D000036 1.9e-13 79.7 101 45.5
TAR626G1921 Trochodendron aralioides HOM05D000081 ORTHO05D000036 4.1e-13 78.6 121 43.0
VMungo1080G0615 Vigna mungo HOM05D000081 ORTHO05D000036 4.1e-13 78.6 100 45.0
RcHm_v2.0_Chr5g0074411 Rosa chinensis HOM05D000081 ORTHO05D000036 7.1e-13 77.8 125 41.6
TAR629G1661 Trochodendron aralioides HOM05D000081 ORTHO05D000036 7.1e-13 77.8 120 43.3
Glyma.04G115500 Glycine max HOM05D000081 ORTHO05D000036 1.2e-12 77.0 100 47.0
Potri.001G472800 Populus trichocarpa HOM05D000081 ORTHO05D000036 1.6e-12 76.6 101 41.6
Glyma.06G320700 Glycine max HOM05D000081 ORTHO05D000036 2.1e-12 76.3 99 43.4
Oeu062668.1 Olea europaea HOM05D000081 ORTHO05D000036 2.1e-12 76.3 116 40.5
MD03G1044400 Malus domestica HOM05D000081 ORTHO05D000036 4.6e-12 75.1 103 46.6
Phvul.005G005800 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 7.8e-12 74.3 100 43.0
Lalb_Chr04g0259421 Lupinus albus HOM05D000081 ORTHO05D000036 1.0e-11 73.9 100 43.0
Actinidia30343 Actinidia chinensis HOM05D000081 ORTHO05D000036 1.3e-11 73.6 97 47.4
FAN25G3806 Fragaria x ananassa HOM05D000081 ORTHO05D000036 2.3e-11 72.8 125 40.0
Lalb_Chr18g0048721 Lupinus albus HOM05D000081 ORTHO05D000036 2.3e-11 72.8 98 42.9
CiPaw.11G211300 Carya illinoinensis HOM05D000081 ORTHO05D000036 6.6e-11 71.2 103 46.6
FvH4_3g41430 Fragaria vesca HOM05D000081 ORTHO05D000036 1.5e-10 70.1 125 39.2
FAN11G0082 Fragaria x ananassa HOM05D000081 ORTHO05D000036 1.5e-10 70.1 125 39.2
FAN21G1723 Fragaria x ananassa HOM05D000081 ORTHO05D000036 2.5e-10 69.3 125 40.0
Oeu055358.1 Olea europaea HOM05D000081 ORTHO05D000036 2.5e-10 69.3 116 38.8
MBI14_g10258_MAGBIO Magnolia biondii HOM05D000081 ORTHO05D000036 1.6e-09 66.6 100 44.0
GSVIVG01014854001 Vitis vinifera HOM05D000081 ORTHO05D000036 1.1e-08 63.9 100 43.0
Sabra16G0321000 Salix brachista HOM05D000081 ORTHO05D000036 1.4e-08 63.5 104 37.5
MBI15_g47426_MAGBIO Magnolia biondii HOM05D000081 ORTHO05D000036 1.8e-08 63.2 129 40.3
Sc03g0011820 Simmondsia chinensis HOM05D000081 ORTHO05D000036 3.1e-08 62.4 141 34.0
CSS0041811 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 4.0e-08 62.0 100 43.0
Nn1g07617 Nelumbo nucifera HOM05D000081 ORTHO05D000036 4.0e-08 62.0 100 40.0
Oeu052021.2 Olea europaea HOM05D000081 ORTHO05D000036 5.2e-08 61.6 124 37.9
Cpa.g.sc12.58 Carica papaya HOM05D000081 ORTHO05D000036 8.9e-08 60.8 101 42.6
PGR083G2605 Punica granatum HOM05D000081 ORTHO05D000036 1.5e-07 60.1 105 39.0
CAN.G492.61 Capsicum annuum HOM05D000081 ORTHO05D000036 9.9e-07 57.4 106 35.8
arahy.Tifrunner.gnm1.ann1.691ACA Arachis hypogaea HOM05D000081 ORTHO05D000036 2.2e-06 56.2 100 37.0
TPR.G16686 Trifolium pratense HOM05D000081 ORTHO05D000036 8.4e-06 54.3 97 37.1


User provided reference genes

Program Settings