Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P681T20 Lonicera japonica HOM05D000237 ORTHO05D006530 3.4e-65 251.5 128 100.0
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 1.1e-26 123.6 140 55.7
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 3.6e-22 108.6 126 55.6
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.4e-21 106.7 126 53.2
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 4.8e-19 98.2 130 50.8
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 3.1e-18 95.5 130 50.0
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 6.5e-16 87.8 138 44.9
vmacro21124 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.9e-15 86.3 128 49.2
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 2.5e-15 85.9 142 43.0
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 4.2e-15 85.1 120 47.5
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 9.4e-15 84.0 134 45.5
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 1.2e-14 83.6 128 44.5
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 2.1e-14 82.8 129 45.0
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 4.7e-14 81.6 129 44.2
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 6.1e-14 81.3 117 47.0
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 8.8e-13 77.4 134 40.3
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 2.2e-11 72.8 135 40.7
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 2.8e-11 72.4 131 43.5
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 8.3e-11 70.9 129 41.9
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 8.3e-11 70.9 129 41.9
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 1.1e-10 70.5 135 43.0
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 3.1e-10 68.9 130 40.8
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 5.4e-10 68.2 137 37.2
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 9.1e-10 67.4 128 39.8
Manes.18G083000 Manihot esculenta HOM05D000237 ORTHO05D006530 2.0e-09 66.2 135 39.3
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 3.5e-09 65.5 126 42.1
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 7.7e-09 64.3 134 41.8
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 1.3e-08 63.5 133 39.8
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 1.3e-08 63.5 128 40.6
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.7e-08 63.2 132 38.6
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 1.7e-08 63.2 128 40.6
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 2.2e-08 62.8 137 38.7
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 2.2e-08 62.8 128 39.8
PGSC0003DMG401025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 3.8e-08 62.0 128 40.6
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.5e-07 59.3 130 40.0
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 3.2e-07 58.9 135 37.8
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 4.2e-07 58.5 135 38.5
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 7.2e-07 57.8 125 39.2
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 9.4e-07 57.4 134 40.3
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.1e-06 56.2 135 39.3
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 2.7e-06 55.8 135 40.0
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 3.6e-06 55.5 136 36.0


User provided reference genes

Program Settings