Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P665T27 Lonicera japonica HOM05D000576 ORTHO05D000368 5.2e-66 254.2 127 100.0
Lj9C718T12 Lonicera japonica HOM05D000576 ORTHO05D000368 2.4e-42 175.6 106 83.0
Lj5A99T72 Lonicera japonica HOM05D000576 ORTHO05D000368 2.3e-37 159.1 105 75.2
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 1.8e-29 132.9 125 57.6
Lj9A565T43 Lonicera japonica HOM05D000576 ORTHO05D000368 5.6e-28 127.9 125 54.4
Lj9A566T51 Lonicera japonica HOM05D000576 ORTHO05D000368 3.7e-27 125.2 126 54.8
Lj4A675G49 Lonicera japonica HOM05D000576 ORTHO05D000368 1.0e-24 117.1 121 55.4
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-24 116.3 120 50.8
Lj1A555T36 Lonicera japonica HOM05D000576 ORTHO05D000368 4.9e-24 114.8 108 57.4
Lj2A749T20 Lonicera japonica HOM05D000576 ORTHO05D000368 4.9e-24 114.8 121 54.5
Lj2A751T36 Lonicera japonica HOM05D000576 ORTHO05D000368 8.4e-24 114.0 121 54.5
Lj5A109G69 Lonicera japonica HOM05D000576 ORTHO05D000368 5.5e-23 111.3 124 51.6
Lj8A85G34 Lonicera japonica HOM05D000576 ORTHO05D000368 6.3e-19 97.8 115 50.4
Lj5A109G71 Lonicera japonica HOM05D000576 ORTHO05D000368 1.4e-18 96.7 107 48.6
Lj6P729T22 Lonicera japonica HOM05D000576 ORTHO05D000368 5.3e-18 94.7 114 47.4
Lj4A675T52 Lonicera japonica HOM05D000576 ORTHO05D000368 3.8e-16 88.6 48 91.7
Lj7A319T20 Lonicera japonica HOM05D000576 ORTHO05D000368 1.1e-15 87.0 113 45.1
Lj7A334T37 Lonicera japonica HOM05D000576 ORTHO05D000368 1.1e-15 87.0 113 45.1
Lj5C127T3 Lonicera japonica HOM05D000576 ORTHO05D000368 2.1e-14 82.8 107 47.7
Lj5A97T93 Lonicera japonica HOM05D000576 ORTHO05D000368 7.9e-14 80.9 104 46.2
Lj4C677G6 Lonicera japonica HOM05D000576 ORTHO05D000368 1.9e-12 76.3 83 53.0
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 2.5e-12 75.9 112 42.0
Cc02_g36480 Coffea canephora HOM05D000576 ORTHO05D000368 4.3e-12 75.1 129 36.4
Rhsim09G0154700 Rhododendron simsii HOM05D000576 ORTHO05D000368 4.3e-12 75.1 104 46.2
Lj7A332T19 Lonicera japonica HOM05D000576 ORTHO05D000368 3.7e-11 72.0 100 43.0
Cc02_g06350 Coffea canephora HOM05D000576 ORTHO05D000368 4.8e-11 71.6 118 37.3
Cfa013470 Carpinus fangiana HOM05D000576 ORTHO05D000368 6.3e-11 71.2 113 39.8
Prupe.7G069300 Prunus persica HOM05D000576 ORTHO05D000368 6.3e-11 71.2 102 41.2
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 1.1e-10 70.5 110 35.5
Lj9A566T50 Lonicera japonica HOM05D000576 ORTHO05D000368 1.1e-10 70.5 70 57.1
CiPaw.11G012600 Carya illinoinensis HOM05D000576 ORTHO05D000368 3.1e-10 68.9 105 41.9
COL.COLO4_34465 Corchorus olitorius HOM05D000576 ORTHO05D000368 3.1e-10 68.9 123 38.2
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 3.1e-10 68.9 116 36.2
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 3.1e-10 68.9 119 37.0
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.9e-10 67.8 105 38.1
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 6.9e-10 67.8 117 40.2
Cc03_g13650 Coffea canephora HOM05D000576 ORTHO05D000368 9.1e-10 67.4 103 40.8
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 1.2e-09 67.0 116 36.2
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.5e-09 66.6 102 39.2
Lj7A552T59 Lonicera japonica HOM05D000576 ORTHO05D000368 1.5e-09 66.6 79 46.8
QL09p002104 Quercus lobata HOM05D000576 ORTHO05D000368 1.5e-09 66.6 103 40.8
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 1.5e-09 66.6 105 40.0
CSS0021660 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.0e-09 66.2 105 40.0
Eucgr.K02764 Eucalyptus grandis HOM05D000576 ORTHO05D000368 2.0e-09 66.2 110 41.8
Lj4C665T5 Lonicera japonica HOM05D000576 ORTHO05D000368 2.0e-09 66.2 122 38.5
Nitab4.5_0000068g0490 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.0e-09 66.2 101 38.6
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.6e-09 65.9 106 39.6
Lj5A96T52 Lonicera japonica HOM05D000576 ORTHO05D000368 2.6e-09 65.9 121 38.0
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 3.4e-09 65.5 118 34.7
Gorai.007G326700 Gossypium raimondii HOM05D000576 ORTHO05D000368 4.5e-09 65.1 116 37.1
Lj1A1065T49 Lonicera japonica HOM05D000576 ORTHO05D000368 4.5e-09 65.1 114 36.8
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 5.9e-09 64.7 116 35.3
QL03p058059 Quercus lobata HOM05D000576 ORTHO05D000368 7.7e-09 64.3 107 35.5
COL.COLO4_29715 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.0e-08 63.9 110 39.1
RcHm_v2.0_Chr3g0449571 Rosa chinensis HOM05D000576 ORTHO05D000368 1.0e-08 63.9 97 39.2
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.3e-08 63.5 112 33.0
Lj8C98G11 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-08 63.2 105 37.1
Lj8C98T11 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-08 63.2 105 37.1
Nitab4.5_0000131g0170 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.7e-08 63.2 101 40.6
Ciclev10008358m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.2e-08 62.8 105 38.1
COL.COLO4_02841 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.2e-08 62.8 114 36.8
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 2.2e-08 62.8 113 35.4
COL.COLO4_29714 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.9e-08 62.4 115 36.5
Lj3C85T2 Lonicera japonica HOM05D000576 ORTHO05D000368 2.9e-08 62.4 68 45.6
COL.COLO4_13493 Corchorus olitorius HOM05D000576 ORTHO05D000368 3.8e-08 62.0 111 40.5
TWI63G1035 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.0e-08 61.6 112 37.5
AUR62008119 Chenopodium quinoa HOM05D000576 ORTHO05D000368 6.5e-08 61.2 102 41.2
MELO3C026220.2 Cucumis melo HOM05D000576 ORTHO05D000368 6.5e-08 61.2 113 36.3
Migut.J01178 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.5e-08 61.2 116 36.2
Gohir.A11G287923 Gossypium hirsutum HOM05D000576 ORTHO05D000368 6.5e-08 61.2 116 36.2
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.5e-08 61.2 98 39.8
Hma1.2p1_1677F.1_g297050 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.5e-08 61.2 98 39.8
Hma1.2p1_1791F.1_g302520 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.5e-08 61.2 98 39.8
RcHm_v2.0_Chr1g0360451 Rosa chinensis HOM05D000576 ORTHO05D000368 6.5e-08 61.2 105 40.0
vmacro19410 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 6.5e-08 61.2 101 40.6
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 8.5e-08 60.8 104 36.5
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 1.1e-07 60.5 113 36.3
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.4e-07 60.1 104 39.4
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 1.4e-07 60.1 119 37.0
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.4e-07 60.1 103 38.8
vmacro05897 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 1.4e-07 60.1 67 47.8
CSS0015792 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.9e-07 59.7 112 36.6
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.9e-07 59.7 105 34.3
Rhsim07G0191400 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.9e-07 59.7 119 37.8
AUR62013515 Chenopodium quinoa HOM05D000576 ORTHO05D000368 2.5e-07 59.3 70 47.1
FAN06G3385 Fragaria x ananassa HOM05D014127 ORTHO05D015665 2.5e-07 59.3 98 38.8
MD12G1064700 Malus domestica HOM05D000576 ORTHO05D000368 2.5e-07 59.3 102 37.3
Prupe.8G038200 Prunus persica HOM05D000576 ORTHO05D000368 2.5e-07 59.3 97 36.1
RcHm_v2.0_Chr3g0471621 Rosa chinensis HOM05D000576 ORTHO05D000368 2.5e-07 59.3 105 37.1
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.5e-07 59.3 103 39.8
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 3.2e-07 58.9 120 30.8
Lj3g0027983 Lotus japonicus HOM05D000576 ORTHO05D000368 3.2e-07 58.9 122 32.8
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 3.2e-07 58.9 109 35.8
QL10p004694 Quercus lobata HOM05D000576 ORTHO05D000368 3.2e-07 58.9 109 36.7
Rhsim11G0190200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.2e-07 58.9 120 36.7
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.2e-07 58.9 95 37.9
vmacro02138 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 3.2e-07 58.9 105 35.2
vmacro23074 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 3.2e-07 58.9 105 35.2
COL.COLO4_14292 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.2e-07 58.5 105 33.3
Nitab4.5_0010358g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 4.2e-07 58.5 101 38.6
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.2e-07 58.5 112 32.1
arahy.Tifrunner.gnm1.ann1.ZMI5M5 Arachis hypogaea HOM05D000576 ORTHO05D000368 5.5e-07 58.2 117 39.3
AUR62003536 Chenopodium quinoa HOM05D002507 ORTHO05D003045 5.5e-07 58.2 124 36.3
COL.COLO4_02753 Corchorus olitorius HOM05D000576 ORTHO05D000368 5.5e-07 58.2 97 38.1
Migut.J00208 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.5e-07 58.2 105 34.3
Lj4g0012458 Lotus japonicus HOM05D000576 ORTHO05D000368 5.5e-07 58.2 107 38.3
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.5e-07 58.2 107 35.5
AUR62034809 Chenopodium quinoa HOM05D000576 ORTHO05D000368 7.2e-07 57.8 99 41.4
COL.COLO4_25985 Corchorus olitorius HOM05D000576 ORTHO05D000368 7.2e-07 57.8 109 37.6
Migut.I00739 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.2e-07 57.8 111 34.2
Migut.I01046 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.2e-07 57.8 97 39.2
Gorai.007G326800 Gossypium raimondii HOM05D000576 ORTHO05D000368 7.2e-07 57.8 113 33.6
QL10p004673 Quercus lobata HOM05D000576 ORTHO05D000368 7.2e-07 57.8 109 35.8
arahy.Tifrunner.gnm1.ann1.RZZ8M9 Arachis hypogaea HOM05D000576 ORTHO05D000368 9.4e-07 57.4 117 39.3
Ciclev10008324m.g Citrus clementina HOM05D000576 ORTHO05D000368 9.4e-07 57.4 101 37.6
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 9.4e-07 57.4 109 35.8
Migut.J00214 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.4e-07 57.4 108 34.3
FAN01G1348 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.4e-07 57.4 107 40.2
Oeu048256.1 Olea europaea HOM05D000576 ORTHO05D000368 9.4e-07 57.4 112 35.7
Rhsim10G0000100 Rhododendron simsii HOM05D000576 ORTHO05D000368 9.4e-07 57.4 100 37.0
RcHm_v2.0_Chr3g0449531 Rosa chinensis HOM05D000576 ORTHO05D000368 9.4e-07 57.4 103 35.0
RcHm_v2.0_Chr3g0449591 Rosa chinensis HOM05D000576 ORTHO05D000368 9.4e-07 57.4 102 36.3
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.4e-07 57.4 107 34.6
TWI18G0117 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.4e-07 57.4 117 35.9
VMungo1215G3115 Vigna mungo HOM05D000576 ORTHO05D000368 9.4e-07 57.4 116 35.3
Ciclev10033832m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.2e-06 57.0 113 35.4
Migut.F01284 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.2e-06 57.0 110 38.2
FvH4_7g08150 Fragaria vesca HOM05D000576 ORTHO05D000368 1.2e-06 57.0 97 40.2
FAN06G0443 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-06 57.0 97 40.2
Lsat_1_v5_gn_8_12640 Lactuca sativa HOM05D000576 ORTHO05D000368 1.2e-06 57.0 117 32.5
TWI63G0418 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.2e-06 57.0 112 33.0
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 1.6e-06 56.6 97 40.2
Dinv11096 Davidia involucrata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 119 36.1
Migut.G01093 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 121 35.5
Migut.I01153 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 97 38.1
Migut.O00220 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 103 36.9
Gohir.D11G305509 Gossypium hirsutum HOM05D000576 ORTHO05D000368 1.6e-06 56.6 113 33.6
Peaxi162Scf00041g00103 Petunia axillaris HOM05D000576 ORTHO05D000368 1.6e-06 56.6 101 35.6
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.6e-06 56.6 111 37.8
Rhsim02G0021500 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.6e-06 56.6 104 34.6
PGSC0003DMG400010328 Solanum tuberosum HOM05D000576 ORTHO05D000368 1.6e-06 56.6 101 36.6
PGSC0003DMG400017941 Solanum tuberosum HOM05D000576 ORTHO05D000368 1.6e-06 56.6 101 36.6
TWI18G0229 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.6e-06 56.6 117 36.8
TWI63G0496 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.6e-06 56.6 112 32.1
Migut.G00964 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-06 56.2 121 34.7
Migut.J00211 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-06 56.2 108 33.3
Lj7P375T27 Lonicera japonica HOM05D000576 ORTHO05D000368 2.1e-06 56.2 101 38.6
Migut.B01302 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.7e-06 55.8 116 33.6
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.7e-06 55.8 117 29.9
Gohir.D11G305503 Gossypium hirsutum HOM05D000576 ORTHO05D000368 2.7e-06 55.8 80 41.2
RcHm_v2.0_Chr1g0330451 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-06 55.8 109 34.9
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 2.7e-06 55.8 114 31.6
AUR62023121 Chenopodium quinoa HOM05D000576 ORTHO05D000368 3.6e-06 55.5 97 33.0
AUR62043974 Chenopodium quinoa HOM05D000576 ORTHO05D000368 3.6e-06 55.5 97 33.0
AUR62043975 Chenopodium quinoa HOM05D000576 ORTHO05D000368 3.6e-06 55.5 97 33.0
AUR62043978 Chenopodium quinoa HOM05D000576 ORTHO05D000368 3.6e-06 55.5 97 33.0
Hma1.2p1_0670F.1_g200460 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 3.6e-06 55.5 105 36.2
RcHm_v2.0_Chr7g0197551 Rosa chinensis HOM05D000576 ORTHO05D000368 3.6e-06 55.5 115 32.2
Dinv38504 Davidia involucrata HOM05D000576 ORTHO05D000368 4.7e-06 55.1 100 39.0
Migut.J00218 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.7e-06 55.1 105 33.3
FAN01G1594 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.7e-06 55.1 97 39.2
Lj6A233T25 Lonicera japonica HOM05D000576 ORTHO05D000368 4.7e-06 55.1 97 37.1
QL03p004102 Quercus lobata HOM05D000576 ORTHO05D000368 4.7e-06 55.1 112 33.9
Ah.08g220280 Amaranthus hybridus HOM05D000576 ORTHO05D000368 6.1e-06 54.7 97 39.2
AUR62028041 Chenopodium quinoa HOM05D000576 ORTHO05D000368 6.1e-06 54.7 107 35.5
COL.COLO4_05517 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.1e-06 54.7 127 30.7
CsaV3_1G000750 Cucumis sativus L. HOM05D000576 ORTHO05D000368 6.1e-06 54.7 113 34.5
Migut.I01047 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.1e-06 54.7 97 37.1
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 6.1e-06 54.7 103 40.8
Gohir.D08G226100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 6.1e-06 54.7 121 34.7
Gorai.004G137200 Gossypium raimondii HOM05D000576 ORTHO05D000368 6.1e-06 54.7 103 40.8
Gorai.004G240100 Gossypium raimondii HOM05D000576 ORTHO05D000368 6.1e-06 54.7 121 34.7
Lju5057A0T61 Lonicera japonica HOM05D000576 ORTHO05D000368 6.1e-06 54.7 105 34.3
Peaxi162Scf00041g00112 Petunia axillaris HOM05D000576 ORTHO05D000368 6.1e-06 54.7 101 37.6
RcHm_v2.0_Chr1g0349301 Rosa chinensis HOM05D000576 ORTHO05D000368 6.1e-06 54.7 68 44.1
COL.COLO4_27090 Corchorus olitorius HOM05D000576 ORTHO05D000368 7.9e-06 54.3 100 33.0
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 7.9e-06 54.3 112 33.0
PGSC0003DMG401027561 Solanum tuberosum HOM05D000576 ORTHO05D000368 7.9e-06 54.3 103 35.0
TWI31G1446 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 7.9e-06 54.3 112 31.2
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 7.9e-06 54.3 109 31.2


User provided reference genes

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