Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P637T4 Lonicera japonica HOM05D000011 ORTHO05D048342 6.5e-54 213.8 105 100.0
Hma1.2p1_0385F.1_g141310 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.2e-10 70.1 103 41.7
Hma1.2p1_2189F.1_g316590 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.2e-10 70.1 103 41.7
DCAR_004853 Daucus carota HOM05D000011 ORTHO05D000018 7.5e-10 67.4 99 43.4
Hma1.2p1_0042F.1_g025760 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 7.5e-10 67.4 90 44.4
Dinv29842 Davidia involucrata HOM05D000011 ORTHO05D000018 1.3e-09 66.6 109 36.7
Hma1.2p1_0385F.1_g141290 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.7e-09 66.2 103 38.8
Hma1.2p1_2189F.1_g316580 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.7e-09 66.2 103 38.8
Hma1.2p1_0385F.1_g141210 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 4.9e-09 64.7 107 38.3
PGSC0003DMG400029344 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.1e-08 63.5 96 42.7
Solyc12g096920.1 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.8e-08 62.8 98 40.8
Sopen12g032730 Solanum pennellii HOM05D000011 ORTHO05D000018 1.8e-08 62.8 98 40.8
Dinv29833 Davidia involucrata HOM05D000011 ORTHO05D000018 2.4e-08 62.4 111 40.5
Hma1.2p1_0267F.1_g107090 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.4e-08 62.4 99 38.4
DCAR_004846 Daucus carota HOM05D000011 ORTHO05D000018 4.1e-08 61.6 73 45.2
DCAR_004842 Daucus carota HOM05D000011 ORTHO05D000018 7.0e-08 60.8 102 37.3
CAN.G566.19 Capsicum annuum HOM05D000011 ORTHO05D000018 9.2e-08 60.5 99 39.4
Hma1.2p1_2643F.1_g325890 Hydrangea macrophylla HOM05D000011 ORTHO05D048342 9.2e-08 60.5 87 42.5
Cc03_g07200 Coffea canephora HOM05D000011 ORTHO05D000018 1.6e-07 59.7 102 39.2
Cc03_g05850 Coffea canephora HOM05D000011 ORTHO05D000018 2.0e-07 59.3 80 40.0
Dinv29836 Davidia involucrata HOM05D000011 ORTHO05D000018 2.0e-07 59.3 106 38.7
FvH4_4g22940 Fragaria vesca HOM05D000011 ORTHO05D000018 2.0e-07 59.3 96 40.6
Nitab4.5_0001980g0060 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.0e-07 59.3 99 39.4
DCAR_004845 Daucus carota HOM05D000011 ORTHO05D000018 3.5e-07 58.5 102 36.3
DCAR_004971 Daucus carota HOM05D000011 ORTHO05D000018 4.5e-07 58.2 103 36.9
DCAR_004985 Daucus carota HOM05D000011 ORTHO05D000018 4.5e-07 58.2 103 36.9
DCAR_004978 Daucus carota HOM05D000011 ORTHO05D000018 7.7e-07 57.4 103 36.9
Hma1.2p1_0926F.1_g237490 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 7.7e-07 57.4 106 36.8
Nitab4.5_0001704g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.7e-07 57.4 99 39.4
Migut.F01425 Erythranthe guttata HOM05D000011 ORTHO05D000018 1.3e-06 56.6 78 43.6
DCAR_004970 Daucus carota HOM05D000011 ORTHO05D000018 2.3e-06 55.8 97 38.1
FAN09G1904 Fragaria x ananassa HOM05D000011 ORTHO05D000018 2.3e-06 55.8 93 39.8
FAN17G3093 Fragaria x ananassa HOM05D000011 ORTHO05D000018 2.3e-06 55.8 96 39.6
FAN07G0136 Fragaria x ananassa HOM05D000011 ORTHO05D000018 3.8e-06 55.1 96 39.6
DCAR_004987 Daucus carota HOM05D000011 ORTHO05D000018 5.0e-06 54.7 103 35.9
Prupe.1G217800 Prunus persica HOM05D000011 ORTHO05D000018 5.0e-06 54.7 86 38.4
RcHm_v2.0_Chr1g0345821 Rosa chinensis HOM05D000011 ORTHO05D000018 5.0e-06 54.7 101 37.6
MSTRG.4155 Avicennia marina HOM05D000011 ORTHO05D000018 6.6e-06 54.3 100 33.0
Cc11_g02000 Coffea canephora HOM05D000011 ORTHO05D000018 6.6e-06 54.3 93 36.6
DCAR_004982 Daucus carota HOM05D000011 ORTHO05D000018 6.6e-06 54.3 99 36.4
DCAR_004988 Daucus carota HOM05D000011 ORTHO05D000018 6.6e-06 54.3 99 36.4
Dinv27077 Davidia involucrata HOM05D000011 ORTHO05D000018 6.6e-06 54.3 103 36.9
FAN01G0317 Fragaria x ananassa HOM05D000011 ORTHO05D000018 6.6e-06 54.3 77 42.9
Hma1.2p1_0926F.1_g237510 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 6.6e-06 54.3 103 35.0
RcHm_v2.0_Chr1g0345911 Rosa chinensis HOM05D000011 ORTHO05D000018 6.6e-06 54.3 101 37.6
GSVIVG01024114001 Vitis vinifera HOM05D000011 ORTHO05D000018 6.6e-06 54.3 85 41.2
RcHm_v2.0_Chr4g0407681 Rosa chinensis HOM05D000011 ORTHO05D000018 8.6e-06 53.9 84 38.1


User provided reference genes

Program Settings