Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 2.9e-89 332.0 184 100.0
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 2.8e-44 182.6 108 74.1
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.1e-43 180.6 108 75.0
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 2.4e-43 179.5 108 73.1
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 2.4e-43 179.5 108 75.0
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 4.0e-43 178.7 108 75.0
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 3.4e-42 175.6 117 70.1
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 3.4e-42 175.6 113 70.8
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 4.5e-42 175.3 109 70.6
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 3.8e-41 172.2 115 67.0
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.8e-41 172.2 111 70.3
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 8.4e-41 171.0 118 68.6
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.1e-40 170.6 110 71.8
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.4e-40 170.2 119 66.4
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 3.2e-40 169.1 114 66.7
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 9.3e-40 167.5 109 72.5
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 9.3e-40 167.5 108 72.2
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.6e-39 166.8 112 67.9
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 2.7e-39 166.0 112 67.9
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 3.5e-39 165.6 104 71.2
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 3.5e-39 165.6 110 70.9
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 3.5e-39 165.6 112 67.9
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 4.6e-39 165.2 108 70.4
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 4.6e-39 165.2 108 70.4
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 6.0e-39 164.9 108 71.3
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 6.0e-39 164.9 110 68.2
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 7.9e-39 164.5 119 66.4
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.3e-38 163.7 109 68.8
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-38 163.7 114 64.9
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 1.8e-38 163.3 108 68.5
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 2.3e-38 162.9 110 68.2
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 3.0e-38 162.5 113 66.4
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 3.0e-38 162.5 112 67.0
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 3.9e-38 162.2 110 66.4
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 5.1e-38 161.8 111 70.3
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 5.1e-38 161.8 110 66.4
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 6.7e-38 161.4 108 66.7
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.1e-37 160.6 108 65.7
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 1.1e-37 160.6 110 65.5
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.1e-37 160.6 112 64.3
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 1.5e-37 160.2 108 67.6
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.9e-37 159.8 110 68.2
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 2.5e-37 159.5 108 68.5
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 5.7e-37 158.3 108 68.5
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 5.7e-37 158.3 110 63.6
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.3e-36 157.1 112 64.3
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.6e-36 156.8 103 70.9
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.8e-36 156.0 111 63.1
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 3.7e-36 155.6 111 64.0
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 6.2e-36 154.8 108 64.8
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 8.2e-36 154.5 108 63.0
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 8.2e-36 154.5 111 64.9
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 1.1e-35 154.1 110 61.8
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 2.4e-35 152.9 108 63.0
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 2.4e-35 152.9 108 65.7
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 2.4e-35 152.9 108 62.0
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 2.4e-35 152.9 113 63.7
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 3.1e-35 152.5 108 63.0
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 3.1e-35 152.5 108 63.0
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 4.1e-35 152.1 102 68.6
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 4.1e-35 152.1 109 62.4
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 5.3e-35 151.8 108 62.0
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 6.9e-35 151.4 109 63.3
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 6.9e-35 151.4 111 62.2
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 9.0e-35 151.0 108 62.0
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.2e-34 150.6 108 61.1
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 2.0e-34 149.8 102 67.6
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 2.0e-34 149.8 112 58.0
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 2.6e-34 149.4 108 63.0
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 2.2e-33 146.4 115 59.1
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.4e-32 143.7 112 59.8
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.2e-32 142.5 110 59.1
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.2e-32 142.5 110 59.1
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 3.5e-31 139.0 94 68.1
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 4.6e-31 138.7 114 56.1
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 7.9e-31 137.9 103 62.1
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 1.8e-30 136.7 129 52.7
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 8.7e-30 134.4 113 52.2
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 8.7e-30 134.4 110 57.3
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.3e-28 130.6 74 78.4
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.3e-28 130.6 114 54.4
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.6e-28 130.2 108 57.4
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 2.0e-26 123.2 96 55.2
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 1.3e-25 120.6 116 55.2
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.4e-24 117.1 107 52.3
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 5.5e-24 115.2 107 48.6
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.0e-18 96.7 78 59.0
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 5.0e-17 92.0 120 38.3
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.6e-15 87.0 126 34.9
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.7e-13 78.6 71 52.1
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.3e-11 72.0 63 49.2
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 7.0e-11 71.6 108 38.9
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.5e-10 68.9 67 49.3
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 4.2e-08 62.4 42 64.3
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.2e-07 60.8 65 41.5
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.1e-07 60.1 35 74.3


User provided reference genes

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