Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P582T18 Lonicera japonica HOM05D000003 ORTHO05D000004 1.5e-55 219.2 100 100.0
Lj2P24T31 Lonicera japonica HOM05D000003 ORTHO05D000004 1.6e-17 92.8 96 40.6
Hund09829 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.4e-12 75.1 95 38.9
Hund22312 Selenicereus undatus HOM05D000003 ORTHO05D000004 4.5e-12 74.7 95 40.0
Hund02994 Selenicereus undatus HOM05D000003 ORTHO05D000004 7.6e-12 73.9 88 42.0
Hund02492 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.3e-11 73.2 92 39.1
Hund12803 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.7e-11 72.8 92 39.1
Hund00002 Selenicereus undatus HOM05D005986 ORTHO05D007467 4.9e-11 71.2 87 39.1
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-10 68.6 85 42.4
MBI02_g21885_MAGBIO Magnolia biondii HOM05D003439 ORTHO05D004062 7.1e-10 67.4 74 45.9
Hund12935 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.6e-09 66.2 78 41.0
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-09 66.2 85 40.0
Hund25051 Selenicereus undatus HOM05D000003 ORTHO05D000004 2.7e-09 65.5 80 38.8
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 3.5e-09 65.1 85 40.0
Gohir.D11G307103 Gossypium hirsutum HOM05D008457 ORTHO05D011002 4.6e-09 64.7 84 38.1
Sopen08g016730 Solanum pennellii HOM05D000003 ORTHO05D012390 7.9e-09 63.9 85 41.2
GSVIVG01003937001 Vitis vinifera HOM05D000003 ORTHO05D000004 7.9e-09 63.9 85 40.0
PGSC0003DMG402011647 Solanum tuberosum HOM05D002779 ORTHO05D003074 1.0e-08 63.5 83 34.9
Lalb_Chr21g0309771 Lupinus albus HOM05D000003 ORTHO05D000004 1.3e-08 63.2 74 39.2
Hund20625 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.3e-08 63.2 84 38.1
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.8e-08 62.8 97 36.1
Hund22310 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.8e-08 62.8 87 36.8
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.3e-08 62.4 89 33.7
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 3.0e-08 62.0 95 33.7
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 3.9e-08 61.6 90 36.7
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 5.1e-08 61.2 90 34.4
Cpa.g.sc109.46 Carica papaya HOM05D000003 ORTHO05D000004 6.7e-08 60.8 87 37.9
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-07 60.1 84 29.8
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-07 60.1 82 35.4
PSO532G0003 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.1 79 35.4
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 1.5e-07 59.7 94 37.2
Aqoxy1G02814 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-07 59.3 72 38.9
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-07 59.3 83 36.1
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-07 58.9 85 32.9
TAR476G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.5e-07 58.9 83 38.6
Cpa.g.sc139.50 Carica papaya HOM05D000003 ORTHO05D000004 3.3e-07 58.5 74 36.5
COL.COLO4_35424 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.3e-07 58.5 72 40.3
PGSC0003DMG400014038 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.3e-07 58.5 84 34.5
CsaV3_4G003750 Cucumis sativus L. HOM05D002423 ORTHO05D002632 4.3e-07 58.2 79 31.6
MBI05_g07846_MAGBIO Magnolia biondii HOM05D003982 ORTHO05D004831 4.3e-07 58.2 86 31.4
MBI05_g11580_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.3e-07 58.2 82 31.7
MBI07_g02009_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.3e-07 58.2 81 35.8
QL11p032628 Quercus lobata HOM05D002228 ORTHO05D002347 4.3e-07 58.2 80 38.8
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-07 58.2 85 38.8
Aqoxy1G02819 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.7e-07 57.8 73 41.1
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.7e-07 57.8 80 35.0
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 5.7e-07 57.8 80 32.5
PSO198G0010 Papaver somniferum HOM05D000003 ORTHO05D000004 5.7e-07 57.8 72 33.3
Hund09322 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.7e-07 57.8 70 40.0
Aqoxy4G00589 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.6e-07 57.0 84 27.4
CSS0022591 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.6e-07 57.0 80 35.0
Cpa.g.sc43.118 Carica papaya HOM05D004758 ORTHO05D006063 9.6e-07 57.0 89 33.7
MBI04_g06213_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.6e-07 57.0 87 33.3
PSO063G0849 Papaver somniferum HOM05D000003 ORTHO05D000004 9.6e-07 57.0 77 32.5
PSO782G3565 Papaver somniferum HOM05D000003 ORTHO05D000004 9.6e-07 57.0 72 38.9
CSS0000411 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 1.3e-06 56.6 57 45.6
CSS0013093 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 1.3e-06 56.6 57 45.6
MBI02_g23961_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-06 56.6 88 29.5
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-06 56.2 80 33.8
MBI07_g44865_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.6e-06 56.2 80 37.5
MBI19_g24071_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.6e-06 56.2 74 35.1
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 1.6e-06 56.2 86 33.7
Cpa.g.sc168.15 Carica papaya HOM05D000003 ORTHO05D000004 2.1e-06 55.8 83 32.5
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.1e-06 55.8 73 35.6
MBI02_g23408_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.1e-06 55.8 83 33.7
Aqoxy1G03271 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.7e-06 55.1 72 34.7
ECA240G2493 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-06 55.1 89 38.2
MBI06_g35598_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.7e-06 55.1 80 35.0
PSO017G3837 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 55.1 78 35.9
PSO170G3817 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 55.1 73 31.5
PSO339G0951 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 55.1 77 33.8
PSO541G1120 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 55.1 76 38.2
Aqoxy3G02928 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.8e-06 54.7 77 33.8
MBI02_g21867_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.8e-06 54.7 87 33.3
MBI14_g04664_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.8e-06 54.7 99 28.3
PSO063G4062 Papaver somniferum HOM05D000003 ORTHO05D000004 4.8e-06 54.7 80 35.0
PSO063G5867 Papaver somniferum HOM05D000003 ORTHO05D000004 4.8e-06 54.7 82 32.9
Thecc.03G017700 Theobroma cacao HOM05D000003 ORTHO05D000004 4.8e-06 54.7 88 35.2
Cpa.g.sc2.86 Carica papaya HOM05D000003 ORTHO05D000004 6.2e-06 54.3 87 34.5
ECA233G2998 Erigeron canadensis HOM05D009093 ORTHO05D010576 6.2e-06 54.3 89 31.5
MBI03_g45148_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.2e-06 54.3 88 34.1
QL10p021333 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-06 54.3 81 33.3
Hund19607 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.2e-06 54.3 60 41.7
Hund20535 Selenicereus undatus HOM05D000003 ORTHO05D000004 6.2e-06 54.3 92 33.7
MBI05_g25766_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D000924 8.2e-06 53.9 78 35.9


User provided reference genes

Program Settings