Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P570T6 Lonicera japonica HOM05D000021 ORTHO05D000010 1.7e-26 122.5 58 100.0
Lj4C558G2 Lonicera japonica HOM05D000021 ORTHO05D000010 4.7e-16 87.8 57 75.4
Lj4C562G4 Lonicera japonica HOM05D000021 ORTHO05D000010 2.8e-13 78.6 56 67.9
Lj7C151G1 Lonicera japonica HOM05D000021 ORTHO05D016971 1.8e-12 75.9 55 65.5
Lj4A532T55 Lonicera japonica HOM05D000021 ORTHO05D017886 4.1e-12 74.7 56 58.9
Lj4C551G2 Lonicera japonica HOM05D000021 ORTHO05D000010 9.5e-09 63.5 41 63.4
Lj4C525G1 Lonicera japonica HOM05D000021 ORTHO05D000010 8.0e-08 60.5 41 61.0
CSS0025266 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D002559 1.0e-07 60.1 54 50.0
Cc02_g16030 Coffea canephora HOM05D000021 ORTHO05D000010 1.2e-06 56.6 58 41.4
Lj4C553G0 Lonicera japonica HOM05D000021 ORTHO05D000010 1.2e-06 56.6 57 47.4
CSS0025578 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.5e-06 56.2 49 49.0
Lj4A536T44 Lonicera japonica HOM05D000021 ORTHO05D000010 1.5e-06 56.2 37 73.0
Gorai.011G040400 Gossypium raimondii HOM05D000021 ORTHO05D000010 2.0e-06 55.8 54 55.6
BcaC02g11577 Brassica carinata HOM05D000071 ORTHO05D000029 4.4e-06 54.7 52 50.0
C04p13830 Brassica napus HOM05D000071 ORTHO05D000029 4.4e-06 54.7 52 50.0
BolC4t22973H Brassica oleracea HOM05D000071 ORTHO05D000029 4.4e-06 54.7 52 50.0
AL4G30950 Arabidopsis lyrata HOM05D000071 ORTHO05D000029 5.7e-06 54.3 52 46.2
Lj6C539T11 Lonicera japonica HOM05D000021 ORTHO05D000010 5.7e-06 54.3 38 57.9
Thhalv10016209m.g Eutrema salsugineum HOM05D000071 ORTHO05D000029 7.5e-06 53.9 52 48.1
Gohir.A10G037501 Gossypium hirsutum HOM05D000021 ORTHO05D000010 7.5e-06 53.9 52 55.8
Lj6C538T18 Lonicera japonica HOM05D000021 ORTHO05D000010 9.8e-06 53.5 38 57.9


User provided reference genes

Program Settings