Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P526T16 Lonicera japonica HOM05D012045 ORTHO05D012344 2.0e-67 259.2 153 100.0
Lj4A539T58 Lonicera japonica HOM05D012045 ORTHO05D012344 3.3e-38 162.2 109 91.7
Lj4A567T9 Lonicera japonica HOM05D000021 ORTHO05D000010 3.5e-24 115.5 97 78.4
Lj4C557T8 Lonicera japonica HOM05D012045 ORTHO05D012344 1.1e-22 110.5 112 71.4
Lj4A539T57 Lonicera japonica HOM05D012045 ORTHO05D022857 1.3e-18 97.1 182 42.3
Lj4A571G45 Lonicera japonica HOM05D000021 ORTHO05D000010 1.3e-15 87.0 49 87.8
COL.COLO4_27016 Corchorus olitorius HOM05D000021 ORTHO05D000010 6.2e-13 78.2 85 47.1
HanXRQChr15g0480491 Helianthus annuus HOM05D000021 ORTHO05D000010 8.1e-13 77.8 134 47.0
Lj4C523G11 Lonicera japonica HOM05D000021 ORTHO05D000010 6.8e-12 74.7 122 53.3
Duzib160G0341 Durio zibethinus HOM05D000021 ORTHO05D000010 2.6e-11 72.8 83 47.0
Cc02_g16030 Coffea canephora HOM05D000021 ORTHO05D000010 7.6e-11 71.2 112 41.1
RcHm_v2.0_Chr7g0213311 Rosa chinensis HOM05D018904 ORTHO05D016947 2.9e-10 69.3 85 38.8
Lj4P564T6 Lonicera japonica HOM05D012045 ORTHO05D012344 4.9e-10 68.6 115 40.9
Haze_19486 Corylus avellana HOM05D000021 ORTHO05D012344 6.4e-10 68.2 78 46.2
Lj6P539T18 Lonicera japonica HOM05D012045 ORTHO05D012344 8.4e-10 67.8 90 45.6
Cc10_g09090 Coffea canephora HOM05D000021 ORTHO05D000010 1.1e-09 67.4 136 39.7
Oeu056112.2 Olea europaea HOM05D000021 ORTHO05D000010 1.4e-09 67.0 89 39.3
Actinidia35591 Actinidia chinensis HOM05D051883 ORTHO05D015223 2.4e-09 66.2 68 52.9
Cc10_g10450 Coffea canephora HOM05D000021 ORTHO05D000010 2.4e-09 66.2 90 37.8
Cc11_g02200 Coffea canephora HOM05D000021 ORTHO05D000010 2.4e-09 66.2 79 43.0
MD07G1035900 Malus domestica HOM05D000021 ORTHO05D000010 3.2e-09 65.9 112 41.1
Cpa.g.sc7.107 Carica papaya HOM05D000021 ORTHO05D000010 5.4e-09 65.1 122 48.4
Cc11_g02190 Coffea canephora HOM05D000021 ORTHO05D000010 5.4e-09 65.1 69 44.9
Gohir.D01G039832 Gossypium hirsutum HOM05D000021 ORTHO05D000010 7.1e-09 64.7 122 36.1
Gorai.011G040400 Gossypium raimondii HOM05D000021 ORTHO05D000010 7.1e-09 64.7 114 47.4
Lj4C562G4 Lonicera japonica HOM05D000021 ORTHO05D000010 7.1e-09 64.7 109 48.6
Lj7C151G1 Lonicera japonica HOM05D000021 ORTHO05D016971 7.1e-09 64.7 109 49.5
TWI14G1242 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 7.1e-09 64.7 105 39.0
Gorai.002G049400 Gossypium raimondii HOM05D000021 ORTHO05D000010 9.2e-09 64.3 122 36.1
MD05G1075800 Malus domestica HOM05D000021 ORTHO05D000010 1.2e-08 63.9 121 35.5
CSS0025578 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.6e-08 63.5 77 44.2
RcHm_v2.0_Chr2g0114381 Rosa chinensis HOM05D000021 ORTHO05D000010 1.6e-08 63.5 85 35.3
Duzib213G0537 Durio zibethinus HOM05D000053 ORTHO05D000035 2.1e-08 63.2 85 40.0
HanXRQChr04g0119411 Helianthus annuus HOM05D021068 ORTHO05D017485 2.7e-08 62.8 103 36.9
CAN.G1267.1 Capsicum annuum HOM05D016353 ORTHO05D017748 3.5e-08 62.4 105 38.1
Gorai.009G364900 Gossypium raimondii HOM05D000021 ORTHO05D000010 3.5e-08 62.4 68 51.5
Lj4A536T43 Lonicera japonica HOM05D000021 ORTHO05D012344 4.6e-08 62.0 59 84.7
Ciclev10018259m.g Citrus clementina HOM05D000021 ORTHO05D000010 7.8e-08 61.2 97 39.2
MD05G1298300 Malus domestica HOM05D000021 ORTHO05D000010 7.8e-08 61.2 85 36.5
Zm00001eb046230 Zea mays HOM05D000132 ORTHO05D000058 7.8e-08 61.2 93 43.0
RcHm_v2.0_Chr5g0059191 Rosa chinensis HOM05D021068 ORTHO05D012344 1.0e-07 60.8 103 43.7
Peaxi162Scf00538g00130 Petunia axillaris HOM05D012045 ORTHO05D012344 1.3e-07 60.5 70 45.7
MD03G1180000 Malus domestica HOM05D000021 ORTHO05D000010 1.7e-07 60.1 85 37.6
RcHm_v2.0_Chr2g0113631 Rosa chinensis HOM05D000021 ORTHO05D000010 1.7e-07 60.1 85 35.3
Oeu057329.1 Olea europaea HOM05D000021 ORTHO05D000010 2.3e-07 59.7 76 42.1
vmacro03921 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.3e-07 59.7 70 52.9
Lj6C538T18 Lonicera japonica HOM05D000021 ORTHO05D000010 3.0e-07 59.3 114 33.3
Prupe.4G213400 Prunus persica HOM05D000021 ORTHO05D000010 3.0e-07 59.3 124 30.6
Lj4A568T28 Lonicera japonica HOM05D000021 ORTHO05D000010 3.9e-07 58.9 62 75.8
Lj6C535G12 Lonicera japonica HOM05D000021 ORTHO05D000010 3.9e-07 58.9 114 33.3
Peaxi162Scf00053g00048 Petunia axillaris HOM05D018904 ORTHO05D016947 3.9e-07 58.9 89 41.6
Lsat_1_v5_gn_4_85600 Lactuca sativa HOM05D000071 ORTHO05D000029 5.1e-07 58.5 78 38.5
MD07G1034900 Malus domestica HOM05D000021 ORTHO05D000010 5.1e-07 58.5 85 34.1
RcHm_v2.0_Chr5g0016021 Rosa chinensis HOM05D000021 ORTHO05D000010 5.1e-07 58.5 112 33.9
Thecc.04G141200 Theobroma cacao HOM05D000053 ORTHO05D000035 5.1e-07 58.5 118 33.1
Gohir.A01G049266 Gossypium hirsutum HOM05D000021 ORTHO05D000010 6.6e-07 58.2 122 33.6
Lj4A571T46 Lonicera japonica HOM05D000021 ORTHO05D000010 6.6e-07 58.2 63 74.6
Glyma.08G078800 Glycine max HOM05D001169 ORTHO05D001002 8.6e-07 57.8 83 36.1
CAN.G647.22 Capsicum annuum HOM05D012045 ORTHO05D012344 1.1e-06 57.4 82 46.3
Ciclev10026928m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.1e-06 57.4 88 39.8
Eucgr.C01475 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.1e-06 57.4 123 33.3
FvH4_5g08280 Fragaria vesca HOM05D000021 ORTHO05D000010 1.1e-06 57.4 88 36.4
MD07G1236500 Malus domestica HOM05D000021 ORTHO05D000010 1.1e-06 57.4 85 35.3
Peaxi162Scf00162g00211 Petunia axillaris HOM05D014506 ORTHO05D017765 1.1e-06 57.4 112 34.8
TAR473G0002 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.1e-06 57.4 88 35.2
Actinidia12437 Actinidia chinensis HOM05D000517 ORTHO05D000751 1.5e-06 57.0 125 32.0
Ciclev10033878m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.5e-06 57.0 134 35.8
MELO3C005209.2 Cucumis melo HOM05D000094 ORTHO05D000455 1.5e-06 57.0 66 42.4
HanXRQChr04g0119481 Helianthus annuus HOM05D021068 ORTHO05D017485 1.5e-06 57.0 103 42.7
Lj4C525G1 Lonicera japonica HOM05D000021 ORTHO05D000010 1.5e-06 57.0 60 75.0
RcHm_v2.0_Chr5g0011691 Rosa chinensis HOM05D000021 ORTHO05D000010 1.5e-06 57.0 112 42.9
CiPaw.10G105000 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.9e-06 56.6 98 33.7
Gohir.A10G000700 Gossypium hirsutum HOM05D000094 ORTHO05D000455 1.9e-06 56.6 86 40.7
RcHm_v2.0_Chr5g0040411 Rosa chinensis HOM05D012045 ORTHO05D012344 1.9e-06 56.6 80 37.5
SalBow6G4279 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.9e-06 56.6 83 37.3
PGSC0003DMG400007758 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.9e-06 56.6 118 46.6
CsaV3_5G017460 Cucumis sativus L. HOM05D000094 ORTHO05D000455 3.3e-06 55.8 66 40.9
Lj4C553G0 Lonicera japonica HOM05D000021 ORTHO05D000010 3.3e-06 55.8 49 57.1
MD07G1236800 Malus domestica HOM05D000021 ORTHO05D000010 4.3e-06 55.5 87 35.6
RcHm_v2.0_Chr5g0011261 Rosa chinensis HOM05D000021 ORTHO05D000010 4.3e-06 55.5 92 47.8
Lj3A861T63 Lonicera japonica HOM05D000517 ORTHO05D000751 5.6e-06 55.1 143 29.4
Peaxi162Scf00205g00723 Petunia axillaris HOM05D000021 ORTHO05D012344 5.6e-06 55.1 134 32.1
RcHm_v2.0_Chr2g0113671 Rosa chinensis HOM05D000021 ORTHO05D000010 5.6e-06 55.1 85 35.3
CANSAT78G1114 Cannabis sativa HOM05D000094 ORTHO05D000455 7.3e-06 54.7 80 40.0
Ciclev10013944m.g Citrus clementina HOM05D000021 ORTHO05D000010 7.3e-06 54.7 69 46.4
Cc09_g06870 Coffea canephora HOM05D000021 ORTHO05D000010 7.3e-06 54.7 100 50.0
Lj4A546G50 Lonicera japonica HOM05D000021 ORTHO05D000010 7.3e-06 54.7 62 67.7
Rhsim13G0188900 Rhododendron simsii HOM05D000021 ORTHO05D000010 7.3e-06 54.7 61 50.8
SalBow6G3760 Salvia bowleyana HOM05D000021 ORTHO05D000010 7.3e-06 54.7 83 36.1
TWI38G0320 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 7.3e-06 54.7 66 47.0
CAN.G1286.25 Capsicum annuum HOM05D000021 ORTHO05D000010 9.6e-06 54.3 75 37.3
CAN.G1363.3 Capsicum annuum HOM05D000021 ORTHO05D000010 9.6e-06 54.3 60 51.7
Ciclev10014011m.g Citrus clementina HOM05D000021 ORTHO05D000010 9.6e-06 54.3 83 37.3
Cc00_g26720 Coffea canephora HOM05D000021 ORTHO05D000010 9.6e-06 54.3 81 37.0
CsaV3_5G017480 Cucumis sativus L. HOM05D000094 ORTHO05D000455 9.6e-06 54.3 66 39.4
Gohir.D10G000900 Gossypium hirsutum HOM05D000094 ORTHO05D000455 9.6e-06 54.3 86 39.5
Gorai.003G178200 Gossypium raimondii HOM05D012045 ORTHO05D012344 9.6e-06 54.3 47 66.0
Gorai.011G001200 Gossypium raimondii HOM05D000094 ORTHO05D000455 9.6e-06 54.3 86 39.5
Hma1.2p1_0733F.1_g210220 Hydrangea macrophylla HOM05D000029 ORTHO05D000854 9.6e-06 54.3 89 36.0
Oeu036078.1 Olea europaea HOM05D002292 ORTHO05D003256 9.6e-06 54.3 100 37.0
SMO203G0070 Selaginella moellendorffii HOM05D010048 ORTHO05D012120 9.6e-06 54.3 77 42.9


User provided reference genes

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