Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P518T39 Lonicera japonica HOM05D001749 ORTHO05D001632 9.9e-56 219.9 115 100.0
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 2.6e-16 89.0 98 55.1
Dinv13495 Davidia involucrata HOM05D001749 ORTHO05D001632 3.2e-14 82.0 122 44.3
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 7.9e-13 77.4 128 43.8
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 7.4e-11 70.9 105 42.9
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 7.4e-11 70.9 105 42.9
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 9.7e-11 70.5 109 44.0
Nitab4.5_0003001g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 9.7e-11 70.5 110 40.9
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 1.3e-10 70.1 119 42.0
Lj2P456T45 Lonicera japonica HOM05D001749 ORTHO05D001632 3.7e-10 68.6 94 47.9
Nitab4.5_0001617g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 4.8e-10 68.2 98 42.9
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 6.3e-10 67.8 122 38.5
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 6.3e-10 67.8 88 48.9
PGSC0003DMG400003523 Solanum tuberosum HOM05D001749 ORTHO05D001632 1.1e-09 67.0 97 44.3
Solyc02g084960.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 1.4e-09 66.6 111 39.6
Sopen02g029630 Solanum pennellii HOM05D001749 ORTHO05D001632 1.8e-09 66.2 111 39.6
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.4e-09 65.9 123 40.7
CiPaw.02G020500 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.2e-08 63.5 105 38.1
CiPaw.01G045700 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.5e-08 63.2 96 38.5
CANSAT01G2116 Cannabis sativa HOM05D001749 ORTHO05D001632 2.0e-08 62.8 108 40.7
Cfa004342 Carpinus fangiana HOM05D001749 ORTHO05D001632 4.5e-08 61.6 95 40.0
EL10As8g23912 Beta vulgaris HOM05D001749 ORTHO05D001632 1.7e-07 59.7 104 38.5
ClCG07G008620 Citrullus lanatus HOM05D001749 ORTHO05D001632 2.9e-07 58.9 104 42.3
Solyc03g033860.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 2.9e-07 58.9 99 41.4
Haze_15059 Corylus avellana HOM05D001749 ORTHO05D001632 3.8e-07 58.5 95 38.9
DCAR_025960 Daucus carota HOM05D001749 ORTHO05D001632 3.8e-07 58.5 87 40.2
QL06p047145 Quercus lobata HOM05D001749 ORTHO05D001632 3.8e-07 58.5 104 34.6
PGSC0003DMG400022575 Solanum tuberosum HOM05D001749 ORTHO05D001632 3.8e-07 58.5 119 37.8
Ah.03g141140 Amaranthus hybridus HOM05D001749 ORTHO05D001632 5.0e-07 58.2 107 40.2
AUR62007601 Chenopodium quinoa HOM05D001749 ORTHO05D001632 5.0e-07 58.2 96 41.7
Thecc.01G031200 Theobroma cacao HOM05D001749 ORTHO05D001632 5.0e-07 58.2 87 43.7
Cpa.g.sc1139.1 Carica papaya HOM05D001749 ORTHO05D001632 6.5e-07 57.8 92 40.2
MELO3C016396.2 Cucumis melo HOM05D001749 ORTHO05D001632 6.5e-07 57.8 112 36.6
MBI10_g06727_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 6.5e-07 57.8 95 40.0
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 6.5e-07 57.8 94 39.4
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 8.5e-07 57.4 103 39.8
Oeu023336.1 Olea europaea HOM05D001749 ORTHO05D001632 1.1e-06 57.0 102 40.2
Sopen03g006620 Solanum pennellii HOM05D001749 ORTHO05D001632 1.1e-06 57.0 97 42.3
AUR62004089 Chenopodium quinoa HOM05D001749 ORTHO05D001632 1.4e-06 56.6 108 38.0
ECA232G4251 Erigeron canadensis HOM05D001749 ORTHO05D001632 1.4e-06 56.6 108 37.0
HanXRQChr09g0261391 Helianthus annuus HOM05D001749 ORTHO05D001632 1.4e-06 56.6 132 40.2
TWI73G0715 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.4e-06 56.6 100 41.0
CsaV3_4G005530 Cucumis sativus L. HOM05D001749 ORTHO05D001632 1.9e-06 56.2 111 35.1
Nitab4.5_0011923g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.9e-06 56.2 121 33.9
CAN.G358.46 Capsicum annuum HOM05D001749 ORTHO05D001632 2.5e-06 55.8 113 36.3
Nitab4.5_0000344g0170 Nicotiana tabacum HOM05D001749 ORTHO05D001632 2.5e-06 55.8 102 40.2
Cc07_g09890 Coffea canephora HOM05D001749 ORTHO05D001632 3.2e-06 55.5 107 39.3
AL5G31290 Arabidopsis lyrata HOM05D001749 ORTHO05D001632 7.2e-06 54.3 100 41.0
arahy.Tifrunner.gnm1.ann1.BPXV57 Arachis hypogaea HOM05D001749 ORTHO05D001632 7.2e-06 54.3 79 44.3
C08p26160 Brassica napus HOM05D001749 ORTHO05D001632 7.2e-06 54.3 111 37.8
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 7.2e-06 54.3 70 47.1


User provided reference genes

Program Settings